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Protein Overview: gi|24376048, gi|...

General Information:
Name(s) found: gi|24376048 [NCBI NR]
gi|24351060 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24376048|ref|NP_720091.1| O-succinylbenzoate synthase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24351060|gb|AAN57535.1|AE015889_9 O-succinylbenzoate-CoA synthase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 374 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: menaquinone biosynthetic process [ISSLink to PubMed article]
    Molecular Function: o-succinylbenzoate-CoA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILTSLSLYL YRLPLDSFLP VGKQRIDHRK GLVLQAKATA DGEVCDTEIS NAEVTDSEVT  60
   61 EGEVKESHVE IAPLSGFDID QQPLSGFSRE SLDEVQQALT VLLPKLQNQS IDCLLEQAEA 120
  121 SPYPSIAFGL SLLHAKLSGK LDAVRPLTTA VPLIYQPTDA PKAELIAKIA SLKPSVRSVK 180
  181 VKVAQTSMED ELSLIYGILS QRPDLKLRLD ANCGFSLEQA LDFAACLPLD SIEYIEEPCQ 240
  241 HPQDNHTLYR AIPLPYALDE SLNDPDYQFV MHEGLTALII KPMLLGSIEK LQRLIDEAHN 300
  301 HGVRCILSSS LESSLGINDL AHLAAILTPD EIPGLDTLTA FSQDLLVPSG KLQCLTLQCL 360
  361 TLNQLERVAS TVQD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..374] PSI-BLAST 39.69897 O-succinylbenzoate synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydro-lyase activity
    		•  1.37262309948483 bayes_pls_golite062009
  • catalytic activity
    		•  0.904956784158091 bayes_pls_golite062009
  • lyase activity
    		•  0.649994293495516 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.500416702127569 bayes_pls_golite062009
  • phosphopyruvate hydratase activity
    		•  0.135147261429977 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle