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Protein Overview: gi|24375923, gi|...

General Information:
Name(s) found: gi|24375923 [NCBI NR]
gi|24350905 [NCBI NR]
Description(s) found:
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  • gi|24375923|ref|NP_719966.1| response regulator/sensor histidine kinase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350905|gb|AAN57410.1|AE015877_1 response regulator/sensor histidine kinase [Shewanella oneidensis MR-1] [NCBI NR]
  • response regulator/sensor histidine kinase [Shewanella oneidensis MR-1]gi|24350905|gb|AAN57410.1| response regulator/sensor histidine kinase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • response regulator/sensor histidine kinase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 1141 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: two-component signal transduction system (phosphorelay) [ISSLink to PubMed article]
    Molecular Function: two-component sensor activity [ISSLink to PubMed article]
    two-component response regulator activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAIQKIRYQ LLCILSYLPL LCMTFITHAE QPNTTTISVG VLANGWGPFQ QVNDQITTGF  60
   61 SVELIQLLAK NLHYQIDWKI YPDWMSLYSA GCNGEVDVLL DAFRTTERTQ CLMFSRSYYT 120
  121 SPTVVVIRYD SRFFRDVSEF GQARIAVEKG FSTEKLVKLH YPTVTEVTFS NTEQALSSVI 180
  181 DKTTDAYIGN LHVANQYISA HPELLIVAQA PLMMENLHLG ITKNNSLLVT QLDNALMALS 240
  241 VEERNALEVT WLGMGDLHFL GHSNFLLRPN EREWLAGLPS LRVGFVDDWM PFSSVNNNGI 300
  301 LVGLIADYLE QFREKLGLDY AAQKTRTWNE IQSALINHEI DLAIIPTRLK AQYPDWHMSE 360
  361 VFTSFPIVIA TARNSPRIAG LSELNFQRVV ITDNLLLPSI KKAYPNIDVV VSANPDEGLT 420
  421 LVAKGNAAAY MGNLAVVAML IDNKFIDELR VAAPTPYKDE LAVAIREPYW QLIPLINRVF 480
  481 SSMSEKEKQQ IRNTWLAVNY SEGISWHTLI TTLLPIAIGL LLFIGGLTIA YLKLRQEINK 540
  541 RRIVENALAI AKENAELATK RKAEFLAAMS HEIRTPMNGL VGMAEQLSFT PLGIEQKQMV 600
  601 QIISNGAEEI LQIINNILDF SKIDMGKMRL ESTPILLREV LDSTLNMVMN DLRTKDLSLY 660
  661 LHVDQGVAAR VTGDSLRIKQ ILFNWVSNAI KFTERGFIEV SVKLEAEEEG QQLLLIGVQD 720
  721 TGIGMNADTQ ARIFNIFEQA DVSTTRSYGG AGLGLAISHT LAEMMGGDII LNSAPHLGTF 780
  781 IGLRIRLPVV AQDEFDEQLQ GLQAYIAISD IKLRHTLSWH LASLGIVLTQ NKANADLLFT 840
  841 DNASDDRQHI LCTHFNEALG YRYQNDQCLL NVNPLTSQAV KDVCYINMGW IDTIVSTPQR 900
  901 DITLKVNWPE CKILLIEDHQ LNQILVQRQL KQLRLDCDIA EHGVQALDLM QQTHYDLILC 960
  961 DCRMPVMDGY TFTQQVRAQE IDGQHVPIIA LTANVLNEQK QRCAAVEMDD LLAKPLHLNE1020
 1021 LHEMLLKWLP HSKPALIDIK ILENAFGRRE ALSKMLLMFK DELESSLKDI QLTAPQLADN1080
 1081 IHRTAGTISM LGLTSIAEQA WLLEEKIRQE DSNNGEVELT EFRAIIIQLI SELNAIIHTS1140
 1141 N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..295] PSI-BLAST 30.221849 No description for 2ia4A was found.
    2 View Details [296..505] FFAS03 7.22 Glutamine-binding protein
    3 View Details [506..795] PSI-BLAST 53.045757 Structure of the entire cytoplasmic portion of a sensor histidine kinase protein
    4 View Details [796..894] deduced N/A No confident structure predictions are available.
    5 View Details [895..1141] PSI-BLAST 51.0 No description for 2oqrA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.22974981386189 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.16461666107495 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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