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Protein Overview: gi|24350644, gi|...

General Information:
Name(s) found: gi|24375710 [NCBI NR]
gi|24350644 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375710|ref|NP_719753.1| peptidoglycan synthetase FtsI [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350644|gb|AAN57197.1|AE015855_8 peptidoglycan synthetase FtsI [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 583 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: peptidoglycan synthetase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRQAKTKQA SKKQKPQLIH WRLYVVVGFV FAMFTCLVGR AAYIQIIEPD KLRHESDMRT  60
   61 LRTTSREVQR GLITDRNGDM LAVSVPVRAV WADPKQVNDN NGFADMRRWQ ALADVLHEPV 120
  121 EDVLDKVRSN PTKRFTYLKR QVTPAVADYI TQLKLPGVFL KSESRRYYPG GEITAQLIGI 180
  181 TNIDDVGIEG VENAYNSWLT GTPSKQKVRK SRDGHVVERL DIVQEGESPN DLVLSIDHRI 240
  241 QQLAYRELKR TTEMNQATSG SIVVLDIHTG EVLAMVNTPS FNPNSRDNFQ TFRMRNRAMT 300
  301 DTFEPGSTIK PFVVAAALEA GTVKSTDVIP TSPGWMRLGG RQVRDASNYG DMTLARILAK 360
  361 SSNVGISKLA LSIPVQQLLG TYQSMGLGSF SGINLTGESA GLIQDRHRWS DFERATLSFG 420
  421 YGLTATTLQL ARMYATLGNG GTLFPVSILK LKKPPEGERV ISEAVAKDVL QMMVSVTEKG 480
  481 GTGTLAHIDG YPVAGKSGTS RKAVAGGYGD DYVALFAGVA PVNNPKLAIV VVVNEPKGDL 540
  541 YYGGSVAGPA FAKVMSGALQ MLNVEPISDK EQVQLAGLAG RAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..583] PSI-BLAST 100.0 PBP2x from Streptococcus pneumoniae strain 5259 with reduced susceptibility to beta-lactam antibiotics

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • drug binding
    		•  3.43867028493374 bayes_pls_golite062009
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.12650314537616 bayes_pls_golite062009
  • penicillin binding
    		•  2.89507018520983 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  2.70174066798582 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.69091897402517 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  1.96547160092829 bayes_pls_golite062009
  • catalytic activity
    		•  1.85492008367309 bayes_pls_golite062009
  • exopeptidase activity
    		•  1.44522375970439 bayes_pls_golite062009
  • binding
    		•  1.11566650386305 bayes_pls_golite062009
  • peptidase activity
    		•  0.376767771035659 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.163657050466595 bayes_pls_golite062009
  • protein binding
    		•  0.0666688846338231 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle