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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24350644, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRQAKTKQA SKKQKPQLIH WRLYVVVGFV FAMFTCLVGR AAYIQIIEPD KLRHESDMRT  60
   61 LRTTSREVQR GLITDRNGDM LAVSVPVRAV WADPKQVNDN NGFADMRRWQ ALADVLHEPV 120
  121 EDVLDKVRSN PTKRFTYLKR QVTPAVADYI TQLKLPGVFL KSESRRYYPG GEITAQLIGI 180
  181 TNIDDVGIEG VENAYNSWLT GTPSKQKVRK SRDGHVVERL DIVQEGESPN DLVLSIDHRI 240
  241 QQLAYRELKR TTEMNQATSG SIVVLDIHTG EVLAMVNTPS FNPNSRDNFQ TFRMRNRAMT 300
  301 DTFEPGSTIK PFVVAAALEA GTVKSTDVIP TSPGWMRLGG RQVRDASNYG DMTLARILAK 360
  361 SSNVGISKLA LSIPVQQLLG TYQSMGLGSF SGINLTGESA GLIQDRHRWS DFERATLSFG 420
  421 YGLTATTLQL ARMYATLGNG GTLFPVSILK LKKPPEGERV ISEAVAKDVL QMMVSVTEKG 480
  481 GTGTLAHIDG YPVAGKSGTS RKAVAGGYGD DYVALFAGVA PVNNPKLAIV VVVNEPKGDL 540
  541 YYGGSVAGPA FAKVMSGALQ MLNVEPISDK EQVQLAGLAG RAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle