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Protein Overview: gi|24350499, gi|...

General Information:
Name(s) found: gi|24375602 [NCBI NR]
gi|24350499 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24375602|ref|NP_719645.1| regulatory protein CsrD [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350499|gb|AAN57089.1|AE015843_1 MSHA biogenesis protein MshH [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 631 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pilus assembly [ISSLink to PubMed article]
    pathogenesis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTTKLTSFW LMSLAAIAFV FLLCAMMSFV QLTYKFQQQK VAELETLLIE HYHTQPDWEL  60
   61 ESWLPPMLLA FNAVEFRLTM KSEVLFAYQG NVQTQNPMVY THLLDPQSGL SMTLSLPQPF 120
  121 DHYSISWYEL LILGVGLLAV IALVRFGHIW LSQQLDGIEE LAQRSRLILQ GKHEQALATP 180
  181 GNGKPRLINR ALTKLLEELQ DAHKERGRFD KFIRSNTFLD AQTRIGNRLF LNNRLDALSH 240
  241 DQGMVAHGVI YLLEMDDLDF IQQAKGEGAV KDLLHATVNG INSILQSLPN SIFARRTHNQ 300
  301 FAIVVPHVSL IEADQLASKL LKVCLSQPLP DGVDNRDNFY HLGCAYFTAG DNVNQLLDEA 360
  361 DMALRAAQLQ GNSNWFMYDK GAIDEEFAKG SVRWRSFLEN ALVQRRFYPF SQPIMDSDGV 420
  421 EHHKEIFTRA RDNQGALVRA TLFIPMANKC GLMPQIERQM IERVLVLLGQ EQHKGQVYSV 480
  481 NLSLDTLMSR AFTHWLKTTL LEYRHLTPQL IFEVSEDIVV QHQDKLQPKL DMISKMGARL 540
  541 CVDHVGQQVV GTYYIRECHF DMIKLHRSIV RHIHLRPENQ LFIRSLIGGL YRTEVLVSAE 600
  601 GVEVFEEWQT LQILGVGMAQ GMYFSDPVEL Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..381] PSI-BLAST 27.154902 Response regulator PleD in complex with c-diGMP
    2 View Details [382..631] PSI-BLAST 64.30103 No description for 2r6oA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleic acid binding
    		•  0.0928619295989472 bayes_pls_golite062009
  • DNA binding
    		•  0.0743796794876224 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle