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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24350499, gi|...
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTTKLTSFW LMSLAAIAFV FLLCAMMSFV QLTYKFQQQK VAELETLLIE HYHTQPDWEL  60
   61 ESWLPPMLLA FNAVEFRLTM KSEVLFAYQG NVQTQNPMVY THLLDPQSGL SMTLSLPQPF 120
  121 DHYSISWYEL LILGVGLLAV IALVRFGHIW LSQQLDGIEE LAQRSRLILQ GKHEQALATP 180
  181 GNGKPRLINR ALTKLLEELQ DAHKERGRFD KFIRSNTFLD AQTRIGNRLF LNNRLDALSH 240
  241 DQGMVAHGVI YLLEMDDLDF IQQAKGEGAV KDLLHATVNG INSILQSLPN SIFARRTHNQ 300
  301 FAIVVPHVSL IEADQLASKL LKVCLSQPLP DGVDNRDNFY HLGCAYFTAG DNVNQLLDEA 360
  361 DMALRAAQLQ GNSNWFMYDK GAIDEEFAKG SVRWRSFLEN ALVQRRFYPF SQPIMDSDGV 420
  421 EHHKEIFTRA RDNQGALVRA TLFIPMANKC GLMPQIERQM IERVLVLLGQ EQHKGQVYSV 480
  481 NLSLDTLMSR AFTHWLKTTL LEYRHLTPQL IFEVSEDIVV QHQDKLQPKL DMISKMGARL 540
  541 CVDHVGQQVV GTYYIRECHF DMIKLHRSIV RHIHLRPENQ LFIRSLIGGL YRTEVLVSAE 600
  601 GVEVFEEWQT LQILGVGMAQ GMYFSDPVEL Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle