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Protein Overview: gi|24350402, gi|...

General Information:
Name(s) found: gi|24375529 [NCBI NR]
gi|24350402 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375529|ref|NP_719572.1| hydratase/decarboxylase family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350402|gb|AAN57016.1|AE015835_12 hydratase/decarboxylase family protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 274 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular aromatic compound metabolic process [ISSLink to PubMed article]
    Molecular Function: carbon-oxygen lyase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPIDTKAQL ESINAAAQEL AQRRAKGEAG ALLQEALRPK DFSQAFAIQQ TIAQQFSAQG  60
   61 NPIAGWKCLL PTAEKTVVAP IYQQDVYLQT AECPLYPSSK GLARVEPELA FEIGNDLPPR 120
  121 ATPYSEAEID AALGKTRLAL ELIKSRYQNP SEANHFDALA DGLVNQGLWL GPELSTPAEI 180
  181 ETGHFALSVA IAHNDQQQTE TLKKAAVHPN GFPKAGLYWL VNFLSAQGIG LTRGQYVITG 240
  241 SYAGVLDLPL NQTCQFHYGD LGQFSLQFVE KVMK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..274] PSI-BLAST 55.522879 Crystal structure of 2-hydroxypentadienoic acid hydratase from Escherichia Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.80884925307773 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds
    		•  0.42396396220722 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
    		•  0.28270216359768 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle