YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24350301, gi|...

General Information:
Name(s) found: gi|24375453 [NCBI NR]
gi|24350301 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|24375453|ref|NP_719496.1| magnesium transporter [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350301|gb|AAN56940.1|AE015827_12 magnesium transporter [Shewanella oneidensis MR-1] [NCBI NR]
  • magnesium transporter [Shewanella oneidensis MR-1]gi|24350301|gb|AAN56940.1| magnesium transporter [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • magnesium transporter [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 454 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: magnesium ion transport [ISSLink to PubMed article]
    Molecular Function: magnesium ion transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVQVSDSLQ VEHRLDQLSQ ALNSGMFVHV RQMLQNMASS DIALILESSP PKARQVLWQL  60
   61 IDQDQLGDIL DELSEELKDP LIRAMSPERV AKATASMDTD DLAYILRSLP DTVYKQVLQS 120
  121 MSLQNRQRVE QALSYPDETA GSLMNTDTVT LRPDVNIDVV LRYLRQRGNL PDTTDTLYVV 180
  181 DKQDKVLGGV KLADLLTCDP NTPISSIIDT DIESIPVGMS DSEVAQLFER HDWVSAPVVD 240
  241 SEGKLLGRIT IDDVVDVIRE DAEHSMMGMA GMDDDEDTFA PVVKSTLRRS LWLTINLFAA 300
  301 LLAASVSNMF EGTIEQFATI AILMTIVPSM GGVAGNQTLA LVIRGIALGH IGQSNARWLI 360
  361 GKELAIGFLN GLMWSILVFI AVLVWKDDIA LASLIGGAML INMTVAGLAG ASIPLILKRL 420
  421 KVDPALAGGM VLTTVTDVIG LFAFLGLATL YLMH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..454] PSI-BLAST 56.39794 No description for 2yvxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • magnesium ion transmembrane transporter activity
    		•  5.70421936582156 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.33792188010109 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  4.32293051865628 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.93353180499293 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.62139215429434 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  3.05955979064833 bayes_pls_golite062009
  • ion channel activity
    		•  2.96289511581809 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  2.85393728592978 bayes_pls_golite062009
  • channel activity
    		•  2.83666655624333 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  2.83666655624333 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  2.80192263321943 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  2.77911418383955 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  2.58754688276363 bayes_pls_golite062009
  • transporter activity
    		•  2.21524357108065 bayes_pls_golite062009
  • gated channel activity
    		•  2.18781915118831 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.10896266379801 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.087339200694 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  1.37302726288049 bayes_pls_golite062009
  • chloride channel activity
    		•  0.854272043830279 bayes_pls_golite062009
  • anion channel activity
    		•  0.854272043830279 bayes_pls_golite062009
  • binding
    		•  0.501912616492394 bayes_pls_golite062009
  • protein binding
    		•  0.00263529689512498 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle