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Protein Overview: gi|24375351, gi|...

General Information:
Name(s) found: gi|24375351 [NCBI NR]
gi|24350172 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375351|ref|NP_719394.1| molybdenum transport regulatory protein ModE [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350172|gb|AAN56838.1|AE015819_2 molybdenum transport regulatory protein ModE [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 259 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription, DNA-dependent [ISSLink to PubMed article]
    molybdate ion transport [ISSLink to PubMed article]
    Molecular Function: transcription factor activity [ISSLink to PubMed article]
    molybdenum ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLHALLTLS LGDKPFANPR RIALLRQVAN TGSISQGAKL AGISYKAAWD AINEMNTTMP  60
   61 EAVVTSEKGG KGGGGAKLTE FGERLLKVYS ITSQVQDMAL TALLDDSVDM HSLLDVMAHF 120
  121 SLKTSARNQL TGRIHSIEPL GLNDSLKVTL AGGQLIQISV THASYERLQL ALNQSILLLF 180
  181 KAPAVIASRD ACERTGQNCV SGHLLSVTEL AYKAELAIDI GGKDVIYSVM PLADIQTLVL 240
  241 GQPCFACFDA TQVIVASMN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] PSI-BLAST 20.154902 N-terminal domain of molybdate-dependent transcriptional regulator ModE; C-terminal domain of molybdate-dependent transcriptional regulator ModE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • molybdenum ion binding
    		•  2.306486700841 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.3574186068153 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.03033432349652 bayes_pls_golite062009
  • DNA binding
    		•  0.926753986189559 bayes_pls_golite062009
  • binding
    		•  0.731921702708422 bayes_pls_golite062009
  • transcription factor activity
    		•  0.638085164477305 bayes_pls_golite062009
  • transcription activator activity
    		•  0.53294679084865 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.53285802828572 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.513853050429619 bayes_pls_golite062009
  • transporter activity
    		•  0.437297481147526 bayes_pls_golite062009
  • protein binding
    		•  0.035220363090062 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle