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Protein Overview: gi|24375069, gi|...

General Information:
Name(s) found: gi|24375069 [NCBI NR]
gi|24349822 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24375069|ref|NP_719112.1| bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349822|gb|AAN56556.1|AE015793_2 2',3'-cyclic-nucleotide 2'-phosphodiesterase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 685 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [ISSLink to PubMed article]
    Molecular Function: 2',3'-cyclic-nucleotide 2'-phosphodiesterase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKKLLAVM ITAALGVSAC GSDDEPIVQA DLRVLETTDL HTNIMDFNYY SGKVDPTIGL  60
   61 VRTASLIHAA RSESKNSVLV DNGDLLQGSP MGDYMAKVGL QMGDVHPAYK AMNLLDYEVG 120
  121 NIGNHEFNYG LDFLNKSLHG AKFPYINANV YCADDDGCWN GVKKGEHLFT PYIIKEKQII 180
  181 DSEGNNQTIK IGYIGFVPPQ ILLWDKQNLT GKVTVEDIVA TAKKYVPEMK AKGADLIIAI 240
  241 PHSGIGSTEN PGDPMAENAT YALTNVKDIN AIMFGHSHSI FPDAKYADLP NTDVTKGLLN 300
  301 GVPAVMPGRW GDNLGVVDFK LERKDGKWSV LSASTKARPI YDGATKTPLV ERDQEIIDAV 360
  361 AAEHQGTLTF VDQPIGIAAA DMYSFLTLVQ DDPTVQIVSD AQIANVKAKL PEALKNLPVL 420
  421 SASAPFKAGG RHGTTSDADQ YVQVDKGALT FKNAADLYLY PNTMVAVKAT GAELKDWLEC 480
  481 SANQFKQIDP TQTAPQELIN WDGHPTYNFD VLDGLTYKID VTQPSKFDRD CAVVNASANR 540
  541 IVDLRYTDEN GKVFTGEEFA AKEFIVASNN YRAFGGKFAG TGSDHVVLEL PDTNREALAA 600
  601 YITAQSKYNE ATGKYEGMVN PSADYNWDFK TINTNVTLDI RFQTQDSDKA ATFIEANKQR 660
  661 EMKKISKDEL GFAVYSINLS QDKTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..621] PSI-BLAST 106.0 5'-NUCLEOTIDASE FROM E. COLI
    2 View Details [622..685] MSA 2.319981 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoprotein phosphatase activity
    		•  6.90309911517124 bayes_pls_golite062009
  • phosphatase activity
    		•  6.28072946025083 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  6.26557024307779 bayes_pls_golite062009
  • hydrolase activity
    		•  6.0929339222298 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  5.57883033400437 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  5.11265802430394 bayes_pls_golite062009
  • catalytic activity
    		•  1.39852585255405 bayes_pls_golite062009
  • acid phosphatase activity
    		•  0.760085320241561 bayes_pls_golite062009
  • calcium-dependent protein serine/threonine phosphatase activity
    		•  0.598330833036731 bayes_pls_golite062009
  • protein binding
    		•  0.420944017984634 bayes_pls_golite062009
  • binding
    		•  0.212656263179037 bayes_pls_golite062009
  • protein kinase activity
    		•  0.0890836633759679 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.0524929216559791 bayes_pls_golite062009
  • kinase activity
    		•  0.0430043477913548 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.39246790349923E-4 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle