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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24375069, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNKKLLAVM ITAALGVSAC GSDDEPIVQA DLRVLETTDL HTNIMDFNYY SGKVDPTIGL  60
   61 VRTASLIHAA RSESKNSVLV DNGDLLQGSP MGDYMAKVGL QMGDVHPAYK AMNLLDYEVG 120
  121 NIGNHEFNYG LDFLNKSLHG AKFPYINANV YCADDDGCWN GVKKGEHLFT PYIIKEKQII 180
  181 DSEGNNQTIK IGYIGFVPPQ ILLWDKQNLT GKVTVEDIVA TAKKYVPEMK AKGADLIIAI 240
  241 PHSGIGSTEN PGDPMAENAT YALTNVKDIN AIMFGHSHSI FPDAKYADLP NTDVTKGLLN 300
  301 GVPAVMPGRW GDNLGVVDFK LERKDGKWSV LSASTKARPI YDGATKTPLV ERDQEIIDAV 360
  361 AAEHQGTLTF VDQPIGIAAA DMYSFLTLVQ DDPTVQIVSD AQIANVKAKL PEALKNLPVL 420
  421 SASAPFKAGG RHGTTSDADQ YVQVDKGALT FKNAADLYLY PNTMVAVKAT GAELKDWLEC 480
  481 SANQFKQIDP TQTAPQELIN WDGHPTYNFD VLDGLTYKID VTQPSKFDRD CAVVNASANR 540
  541 IVDLRYTDEN GKVFTGEEFA AKEFIVASNN YRAFGGKFAG TGSDHVVLEL PDTNREALAA 600
  601 YITAQSKYNE ATGKYEGMVN PSADYNWDFK TINTNVTLDI RFQTQDSDKA ATFIEANKQR 660
  661 EMKKISKDEL GFAVYSINLS QDKTK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle