YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24375058, gi|...

General Information:
Name(s) found: gi|24375058 [NCBI NR]
gi|24349806 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24375058|ref|NP_719101.1| phosphoribosylaminoimidazole carboxylase, catalytic subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349806|gb|AAN56545.1|AE015791_9 phosphoribosylaminoimidazole carboxylase, catalytic subunit [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 163 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: purine ribonucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: phosphoribosylaminoimidazole carboxylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQALVAVVMG SKSDWPTMEA AAEIMDKLQV PYHVEVVSAH RTPDKLMEFA AGAADRGFKI  60
   61 IIGGAGGAAH LPGMIASKTR LPVLGVPVQS KALSGMDSLL SIVQMPKGIA VGTLAIGTAG 120
  121 AFNAGLLACQ ILANNDVALA ARLDAFREEQ TRAVLDNPDP REV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] PSI-BLAST 59.0 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoribosylaminoimidazole carboxylase activity
    		•  12.126616405613 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  8.23768576957333 bayes_pls_golite062009
  • catalytic activity
    		•  1.94758748334979 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.735133792277863 bayes_pls_golite062009
  • lyase activity
    		•  0.685887227538264 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle