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Protein Overview: gi|24349541, gi|...

General Information:
Name(s) found: gi|24374849 [NCBI NR]
gi|24349541 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24374849|ref|NP_718892.1| L-allo-threonine aldolase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349541|gb|AAN56336.1|AE015771_6 L-allo-threonine aldolase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular amino acid metabolic process [ISSLink to PubMed article]
    Molecular Function: threonine aldolase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDLRSDTVT QPTEAMRLAM SRAEVGDDVY GDDPTVNSLQ DMAAEMFGFE SALFTASGTQ  60
   61 ANLLALMAHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQLDGT IALTDVEAAI 120
  121 KPDDIHFART RLLSLENTIG GKVLSQAYLA NAQALAFQRG LKIHLDGARV ANAAVAQGIA 180
  181 IADIAAHFDS VSICLSKGLC APVGSLLLGD ERLIKKATRW RKMLGGGMRQ AGILAAAGKL 240
  241 ALTEQVERLA EDHENAAYLA QQLSQLDEFD IDLASVQTNM VFATLASHVD EQALVKRCRG 300
  301 EGILISPGRT LRFVTHKDVS RQDIDKVLQV FKLHLQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..337] PSI-BLAST 59.69897 Crystal structure of L-ALLO-threonine aldolase (tm1744) from Thermotoga maritima at 2.25 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glycine dehydrogenase (decarboxylating) activity
    		•  2.63753310919108 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  2.63753310919108 bayes_pls_golite062009
  • transferase activity
    		•  2.59075614411581 bayes_pls_golite062009
  • threonine aldolase activity
    		•  2.36742457876142 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  1.87460342369605 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.67701710033155 bayes_pls_golite062009
  • DNA binding
    		•  1.4774443071095 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.39741122443159 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • transcription factor activity
    		•  1.15775909410582 bayes_pls_golite062009
  • binding
    		•  1.09053123792737 bayes_pls_golite062009
  • O-phospho-L-serine:2-oxoglutarate aminotransferase activity
    		•  0.994935084630764 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.681623261233707 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.60304280865376 bayes_pls_golite062009
  • glycine C-acetyltransferase activity
    		•  0.367632398200112 bayes_pls_golite062009
  • structural molecule activity
    		•  0.347975812448725 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.271623203801431 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • L-allo-threonine aldolase activity
    		•  0.140152839681041 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.11598778799668 bayes_pls_golite062009
  • 4-aminobutyrate transaminase activity
    		•  0.0779403509221881 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle