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Protein Overview: gi|24349151, gi|...

General Information:
Name(s) found: gi|24374555 [NCBI NR]
gi|24349151 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374555|ref|NP_718598.1| siderophore biosynthesis protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349151|gb|AAN56042.1|AE015739_6 siderophore biosynthesis protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 498 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: siderophore biosynthetic process [ISSLink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPKKEIDR TIYDLLGIGI GPFNLGLAAL CEPINDLSCL FLDAKTEFDW HPGMLINSSR  60
   61 LQTPFMSDLV TMADPTSRFS YLNFAKQTSR LYSFYIRENF FLPRHEYNQY CQWVSKQLSN 120
  121 LNFGVKVTQV NYNAGEGIYA VTAIDRRSGK PLTYLCRKLV LGTGTTPYLP DNCPIQDPRV 180
  181 MHSASYMQQK TYLQSQSAIT VIGSGQSAAE IFYDLLQDID IYGYQLNWMT RSPRFYPLEY 240
  241 TKLTLEMTSP DYVDYFHELS SEKRHRLITE QKSLYKGINA ELINDIYDLL YQKRLISNIQ 300
  301 CQLLTNVALT AIDTSGDKLK LQFKHLEQDY ALDQLTSAVV LGTGYQYHLP DFIQGIKSQI 360
  361 EFDDHGQLAI QRDYGIDVRG DIFIQNAGLH THGISSPDLG MGCYRNATIL QAVLGYAPYP 420
  421 IETRIAFQTF APCNIADAKR QPLESNTHSA VTPSKTRQGL NPSAKSVQQP SIEPQTALRI 480
  481 APTGGNVSAL MAPNKEAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..498] PSI-BLAST 59.69897 Dihydrolipoamide dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  2.70464660743861 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  2.52390386317571 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  2.36100558981647 bayes_pls_golite062009
  • catalytic activity
    		•  2.35839632763616 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  2.30491166641926 bayes_pls_golite062009
  • binding
    		•  1.30824465622666 bayes_pls_golite062009
  • antioxidant activity
    		•  1.15612787867475 bayes_pls_golite062009
  • disulfide oxidoreductase activity
    		•  0.905076028978344 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions
    		•  0.87904288478579 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
    		•  0.37795133659497 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  0.364308821777151 bayes_pls_golite062009
  • pyruvate dehydrogenase activity
    		•  0.12794918372939 bayes_pls_golite062009
  • protein binding
    		•  0.065994258320842 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.61

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle