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Protein Overview: gi|24349132, gi|...

General Information:
Name(s) found: gi|24374540 [NCBI NR]
gi|24349132 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24374540|ref|NP_718583.1| hypothetical protein SO_3015 [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349132|gb|AAN56027.1|AE015738_2 conserved hypothetical protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 262 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: chromosome condensation [ISSLink to PubMed article]
    chromosome segregation [ISSLink to PubMed article]
    Molecular Function: binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGTQQSLPL AVVRGQAMTE MPQDLFIPPE ALEVFLESFE GPLDLLLYLI RKQKLDVVDL  60
   61 PISQITAQYL EYIAMLTQAR IELASDYLVM AATLAEIKSR LLLPRMVAED EVEEDPRAQL 120
  121 IRQLKAYEVI KEASQKIDDL PRLERDVFQA TAAPSPNIKP LVIPPDVSLF EIARAFGDVL 180
  181 KRIDAYEDHH VKREQLSTRE RMSQILAMLN SEDFTPFERL FSVEEGRAGV VVTFLALMEL 240
  241 VKELLVELYQ TEPFSTIYVK AY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] Pfam 4.327902 No description for PF02616.5 was found. No confident structure predictions are available.
    2 View Details [185..262] FFAS03 1.52 Sc Smc1hd:Scc1-C complex, ATPgS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.88909660213693 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.659146952966611 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.526614151800537 bayes_pls_golite062009
  • DNA binding
    		•  0.443743931209129 bayes_pls_golite062009
  • protein binding
    		•  0.215355480170793 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.0198908199689938 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle