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Protein Overview: gi|24374531, gi|...

General Information:
Name(s) found: gi|24374531 [NCBI NR]
gi|24349120 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374531|ref|NP_718574.1| prophage LambdaSo, type II DNA modification methyltransferase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349120|gb|AAN56018.1|AE015737_16 prophage LambdaSo, type II DNA modification methyltransferase, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: provirus [ISSLink to PubMed article]
    Biological Process: DNA modification [ISSLink to PubMed article]
    Molecular Function: DNA (cytosine-5-)-methyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGLIVDNFA GGGGASTGMA WALGRSVDIA INHDQDAIAM HSANHPETLH YCESVFDVDP  60
   61 VQATAGKPVA LAWFSPDCKH FSKAKGTKPV NKEIRGLAWV TIRWAMKVRP RVIMLENVEE 120
  121 FKTWGPLIQC PVTDAMHPCP ERKGETFNAF VSMLSTGVDA DHPALTECVE TLGLLDSAKL 180
  181 IKGLGYKVEF RELRACDYGA PTIRKRLFMI ARCDGQPIVW PQPTHGAPDS EAVKSGKLLP 240
  241 WRTAAECIDW SLPCKSIFGR KKPLAENTLR RIAKGIQRFV IDAKEPFIVP NDVQLAPFIT 300
  301 EHANASSQRN MPVNEPLRTI CAQVKGGHFA VVQPVLEKVN DNIPTFTEWF AKTKNFGGSY 360
  361 EEYVSLYGDD QLTDPVLTAA NICKHYGGNY TGPGDDLNNP LPTVTTVDHN ALITSHMIKL 420
  421 RGTNIGFPMD EPAHTITAGG LHLGEVRAFF IKYYGNEQDG VACNEPLHTI TTNDRFGLVM 480
  481 IKGEPYQIID IGMRMLEPHE LFACQGFNPE YIINNYNGKS SKKQQVARVG NSVPPQFAEA 540
  541 LTRANLPELC TQTAEAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..389] PSI-BLAST 65.154902 DNA methylase HaeIII
    2 View Details [390..557] FFAS03 3.18 DNA methylase HhaI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • site-specific DNA-methyltransferase (adenine-specific) activity
    		•  6.58294643435335 bayes_pls_golite062009
  • DNA-methyltransferase activity
    		•  5.13110226096978 bayes_pls_golite062009
  • DNA (cytosine-5-)-methyltransferase activity
    		•  2.86911702393325 bayes_pls_golite062009
  • transferase activity
    		•  2.22303238506686 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.75500643076741 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  1.71409699782588 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.67663666042395 bayes_pls_golite062009
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  1.11696851969974 bayes_pls_golite062009
  • histone methyltransferase activity (H4-R3 specific)
    		•  0.853618803557417 bayes_pls_golite062009
  • RNA methyltransferase activity
    		•  0.817509452491588 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  0.568750701708631 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.49459112494682 bayes_pls_golite062009
  • protein-arginine omega-N symmetric methyltransferase activity
    		•  0.332766006729323 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  0.230719796976667 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle