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Protein Overview: gi|24349046, gi|...

General Information:
Name(s) found: gi|24374467 [NCBI NR]
gi|24349046 [NCBI NR]
Description(s) found:
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  • gi|24374467|ref|NP_718510.1| prophage LambdaSo, tail assembly protein I [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349046|gb|AAN55954.1|AE015733_6 prophage LambdaSo, tail assembly protein I [Shewanella oneidensis MR-1] [NCBI NR]
  • prophage LambdaSo, tail assembly protein I [Shewanella oneidensis MR-1]gi|24349046|gb|AAN55954.1| prophage LambdaSo, tail assembly protein I [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • prophage LambdaSo, tail assembly protein I [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 209 amino acids

    Gene Ontology:
    Cellular Component: provirus [TASLink to PubMed article]
    Biological Process: virion assembly [ISSLink to PubMed article]
    Molecular Function: catalytic activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTHTTIKLS GSLASRFGRV HQRLLETGTT TEAFSALKNT LQGFELFIKE QAKLGLRYAI  60
   61 FRNGRNTGMD EFELAGTNEI RIVPVISGSK RGGILQTILG AVMIVVGAYF GQGWLVQAGV 120
  121 GLVAGGVVQM LSPQAKGLNG REAAENAPSY AFGGAVNTTA AGNPVGIGYG KRRIGGAIIS 180
  181 AGIYAEDIAT SKRPIQSGGG NGNGNQQEP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] FFAS03 1.13 Crystal Structure of MoaD related protein from Thermus thermophilus HB8

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.25914852926474 bayes_pls_golite062009
  • protein binding
    		•  0.441549336484559 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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