YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24374120, gi|...

General Information:
Name(s) found: gi|24374120 [NCBI NR]
gi|24348613 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24374120|ref|NP_718163.1| septum site-determining protein MinD [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348613|gb|AAN55607.1|AE015699_5 septum site-determining protein MinD [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: selection of site for barrier septum formation [ISSLink to PubMed article]
    Molecular Function: ATPase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQIIVVTSG KGGVGKTTSS AAIATGLAIQ GHKTVVIDFD IGLRNLDLIM GCERRVVYDF  60
   61 VNVINGEANL NQALIKDKRC EKLYVLPASQ TRDKDALTKE GVGRVLDDLA KEFEFIICDS 120
  121 PAGIEQGAMM ALYFADIAIV TTNPEVSSVR DSDRILGMLQ SKSRRAELSL EPIKEYLLLT 180
  181 RYSPSRVKSG EMLSVDDVKE ILAIDLLGVI PESQSVLKAS NSGVPVIIDQ ESDAGAAYSD 240
  241 TVARLLGEDV PVRFITEEKK GFLQRIFGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] PSI-BLAST 34.69897 Cell division regulator MinD

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleoside-triphosphatase activity
    		•  2.50267116518023 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.42957469111629 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.40943522107938 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.40733363368781 bayes_pls_golite062009
  • binding
    		•  1.8576045268999 bayes_pls_golite062009
  • hydrolase activity
    		•  1.10968068468793 bayes_pls_golite062009
  • catalytic activity
    		•  0.458437698837681 bayes_pls_golite062009
  • protein binding
    		•  0.378225828131122 bayes_pls_golite062009
  • nucleotide binding
    		•  0.0601614967638421 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.0518926528648858 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.0231586743339878 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0231035204040646 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle