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Protein Overview: gi|24374030, gi|...

General Information:
Name(s) found: gi|24374030 [NCBI NR]
gi|24348500 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24374030|ref|NP_718073.1| keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348500|gb|AAN55517.1|AE015690_5 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 213 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: Entner-Doudoroff pathway [ISSLink to PubMed article]
    Molecular Function: 2-dehydro-3-deoxy-phosphogluconate aldolase activity [ISSLink to PubMed article]
    4-hydroxy-2-oxoglutarate aldolase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLENNWSLQP QDIFKRSPIV PVMVINKIEH AVPLAKALVA GGISVLEVTL RTPCALEAIT  60
   61 KIAKEVPEAL VGAGTILNEA QLGQAIAAGA QFIITPGATV ELLKAGMQGP VPLIPGVASI 120
  121 SEVMTGMALG YTHFKFFPAE ASGGVDALKA FSGPLADIRF CPTGGITPSS YKDYLALKNV 180
  181 DCIGGSWIAP TDAMEQGDWD RITQLCKEAI GGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 40.522879 KDPG aldolase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 2-dehydro-3-deoxy-phosphogluconate aldolase activity
    		•  3.5031381823147 bayes_pls_golite062009
  • catalytic activity
    		•  2.67031204377352 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  0.840107349031025 bayes_pls_golite062009
  • lyase activity
    		•  0.740424046054758 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  0.643395146148785 bayes_pls_golite062009
  • transferase activity
    		•  0.464721888799972 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.351872954170322 bayes_pls_golite062009
  • transaldolase activity
    		•  0.337067552042715 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle