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Protein Overview: gi|24348497, gi|...

General Information:
Name(s) found: gi|24374027 [NCBI NR]
gi|24348497 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24374027|ref|NP_718070.1| aminotransferase AlaT [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348497|gb|AAN55514.1|AE015690_2 aspartate aminotransferase, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: aspartate biosynthetic process [ISSLink to PubMed article]
    Molecular Function: transaminase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPIIKSNKL DTVCYDIRGP VHKEARRLED EGHRILKLNI GNPAPFGFEA PEEIVRDVIL  60
   61 NLPSAQGYCE SKGLFSARKA IVQHYQAQGI YDVDIEDVYI GNGVSELIMM AMQGLLNTAD 120
  121 EILIPSPDYP LWTAAANLAG GKAVHYRCDE EADWFPDLDD IKSKISSRTR GIVLINPNNP 180
  181 TGAVYSKELL LQVVELCREH NLILFADEIY DKILYDEAKH IPAASLSDDI LTVTFNGLSK 240
  241 AYRAAGFRIG WMMLSGNLKA AKSYIEGLDM LASMRLCANV PNQHAIQTAL GGYQSINELI 300
  301 LPSGRLTVQR DTCYELLNQI PGVSVKKPKG ALYAFPKLDM KKFNLRDDER LVLDLLRDKK 360
  361 ILLVHGTAFN WPEPDHLRVV FLPYKEDLTK ALTEFGNFLE TYKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..404] PSI-BLAST 83.69897 Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  4.43277563699654 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • transferase activity
    		•  0.737426388870721 bayes_pls_golite062009
  • 4-aminobutyrate transaminase activity
    		•  0.487922584683825 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  0.390162083170876 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  0.390162083170876 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
    		•  0.212259855101758 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds
    		•  0.130931097173495 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.0833010353195099 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle