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Protein Overview: gi|24348028, gi|...

General Information:
Name(s) found: gi|24373675 [NCBI NR]
gi|24348028 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373675|ref|NP_717718.1| asparaginase family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348028|gb|AAN55162.1|AE015653_3 asparaginase family protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular amino acid metabolic process [ISSLink to PubMed article]
    Molecular Function: asparaginase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQNTHANEK PFAIAIHGGA GTISKANLTP ELRQAYKDKL KEAVDKGSKV LEQGGDSLVA  60
   61 VQTAINVLEN SPLFNAGVGS VYTYDGGHEL DASIMDGKTM NAGAVAGVRH IANPIDLALA 120
  121 VMNKSEHVML SGAGAEEFAL TQGFTLVANS HFDSDARYQQ LLDARQKLQA AQKSEQIAGI 180
  181 EMNDLDYKFG TVGAVALDKN GNLAAGTSTG GMTAKRFGRI GDSPVIGAGT YAENGVCAVS 240
  241 ATGHGEFFIR YQVAGDICAR VKYQQKSILQ AADEVINQRL ITAGGSGGVI AVDHRGNIAT 300
  301 PFNTEGMYRA SRSNGEPAQV MIWQDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 80.0 Glycosylasparaginase (aspartylglucosaminidase, AGA)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
    		•  3.99955121316975 bayes_pls_golite062009
  • asparaginase activity
    		•  2.94567124791739 bayes_pls_golite062009
  • asparagine synthase (glutamine-hydrolyzing) activity
    		•  2.93045515439744 bayes_pls_golite062009
  • peptidase activity
    		•  1.97100432849331 bayes_pls_golite062009
  • endopeptidase activity
    		•  1.85094474974087 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  1.80929145813513 bayes_pls_golite062009
  • hydrolase activity
    		•  1.49820844608839 bayes_pls_golite062009
  • catalytic activity
    		•  1.19663085909195 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  0.235585044844293 bayes_pls_golite062009
  • binding
    		•  0.104740933438894 bayes_pls_golite062009
  • protein binding
    		•  0.00621436730716318 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle