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Protein Overview: gi|24347717, gi|...

General Information:
Name(s) found: gi|24373436 [NCBI NR]
gi|24347717 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373436|ref|NP_717479.1| S-adenosylmethionine decarboxylase proenzyme, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347717|gb|AAN54923.1|AE015630_5 S-adenosylmethionine decarboxylase proenzyme, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 312 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: spermidine biosynthetic process [ISSLink to PubMed article]
    spermine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: adenosylmethionine decarboxylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFFEGAEKK LEISLTPKAV SLRQRGLAFW TTLVACANAE ILSKISNKDC DAYLLSESSL  60
   61 FVWDNKILIL TCGNSTLIEA ACYFINSLGS EHIAALCYQR KNEYQAQLQS TTFAEDIAQL 120
  121 RTLISGQAFR VGHLDAHHHY VFCAAGVPIT QVGTRLELMM YHIRGELAEY LNDPVQTEQG 180
  181 IVHRLKLTQL FPEFQLDMHC FKPTGFSLNA IQGSHYFTLH ITPSAGQGEH SYVSFETNLN 240
  241 LAAYPYPVVA QLISLFAPSS WDLVSVNQLI STAGLSEHLC VGHCSITTEQ GNYIDFNHYQ 300
  301 QRQTEELFPK FM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..312] PSI-BLAST 120.0 S-adenosylmethionine decarboxylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • adenosylmethionine decarboxylase activity
    		•  6.84247797666468 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  3.32152822935886 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  2.72149419399869 bayes_pls_golite062009
  • catalytic activity
    		•  1.62887824627302 bayes_pls_golite062009
  • lyase activity
    		•  1.49916840552571 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle