YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24347717, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFFEGAEKK LEISLTPKAV SLRQRGLAFW TTLVACANAE ILSKISNKDC DAYLLSESSL  60
   61 FVWDNKILIL TCGNSTLIEA ACYFINSLGS EHIAALCYQR KNEYQAQLQS TTFAEDIAQL 120
  121 RTLISGQAFR VGHLDAHHHY VFCAAGVPIT QVGTRLELMM YHIRGELAEY LNDPVQTEQG 180
  181 IVHRLKLTQL FPEFQLDMHC FKPTGFSLNA IQGSHYFTLH ITPSAGQGEH SYVSFETNLN 240
  241 LAAYPYPVVA QLISLFAPSS WDLVSVNQLI STAGLSEHLC VGHCSITTEQ GNYIDFNHYQ 300
  301 QRQTEELFPK FM

Type	Start	End	Confidence
Signal Peptide	1	39	0.52
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	312	0.98