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Protein Overview: DEOC_SHEON

General Information:
Name(s) found: DEOC_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Deoxyribose-phosphate aldolase OS=Shewanella oneidensis (strain MR-1) GN=deoC PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 256 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: generation of precursor metabolites and energy [ISSLink to PubMed article]
    Molecular Function: deoxyribose-phosphate aldolase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLKKAAQR AIELMDLTTL NDDDTDQKVI DLCHKAVTPA GNTAAICIYP RFIPIARKTL  60
   61 DELGAEDIQI ATVTNFPHGN DDIAIAVLET RAAVAYGADE VDVVFPYRAL MEGNETVGYE 120
  121 LVKACKEACG EVLLKVIIES GVLADPVLIR RASELSIEAG ADFIKTSTGK VPVNATLEAA 180
  181 EIMLTVISEK NTKVGFKPAG GVRDAAQAAE FLGVAERILG ADWVSPRTFR FGASSLLNSL 240
  241 LHTLELADAP KRTQGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..256] PSI-BLAST 54.221849 Deoxyribose-phosphate aldolase DeoC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.67031204377352 bayes_pls_golite062009
  • deoxyribose-phosphate aldolase activity
    		•  2.42732299324236 bayes_pls_golite062009
  • kinase activity
    		•  1.94076427145239 bayes_pls_golite062009
  • fructose-bisphosphate aldolase activity
    		•  1.57588823292155 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  1.53236719840557 bayes_pls_golite062009
  • transaldolase activity
    		•  1.20024248197006 bayes_pls_golite062009
  • transferase activity
    		•  0.464721888799972 bayes_pls_golite062009
  • aldehyde-lyase activity
    		•  0.351872954170322 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle