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Protein Overview: gi|24346183, gi|...

General Information:
Name(s) found: gi|24372259 [NCBI NR]
gi|24346183 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24372259|ref|NP_716301.1| prophage MuSo1, F protein, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346183|gb|AAN53746.1|AE015512_13 prophage MuSo1, F protein, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 445 amino acids

    Gene Ontology:
    Cellular Component: provirus [TASLink to PubMed article]
    Biological Process: virion assembly [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKQRVPETV DLSIAINQAP ADAVAYFRAK GFAISDDWQD VWTRAHARAF TVAKATQMDV  60
   61 LTAIRNEVDA ALSQGLTAKQ FQANLKPQLE KLGWWGKKEV DGREVQLGSP YRLNTIYRQN 120
  121 LQTAYMAGRY RRMLSRTKTH PYWQYVAIDD GQTRPAHARL RGKVFRFDDP IWDIIYPPNG 180
  181 WGCRCRVRAL TEAQVKAMGL TVENGEGYIH RFDTETVARG TGEVLTVPHA RIDLPDGSSM 240
  241 SPDLGWAYSP GEAAFGTDVA VAKKLGSIQS LDTRAQFIQA LNNSPLRQAQ FAQWTDEVLA 300
  301 THPGQKRRPG LGVQALGFMT PSIQAAVTAR LGAEPTALLA IGEKQLVHAD SPRHIKEGVA 360
  361 LTRDEYQQLP LMLAQPEAVL WDSKNQNLLY VYATEDDGRK VKVIINSAWK MKRQQAMDAV 420
  421 INVYKINAVD LKHGQYELLE GKLEG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] Pfam 41.086186 No description for PF04233.5 was found. No confident structure predictions are available.
    2 View Details [208..445] MSA 3.05096 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle