YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FTHS_SHEON

General Information:
Name(s) found: FTHS_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • Formate--tetrahydrofolate ligase OS=Shewanella oneidensis (strain MR-1) GN=fhs PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 570 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: one-carbon metabolic process [ISSLink to PubMed article]
    Molecular Function: formate-tetrahydrofolate ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTDMEISRR AHLKDIAQLG AEFGLLPEEM QLFGNTKAKV DLQVQQRLAG QPKGKLIIVT  60
   61 AVTPTPHGEG KTVTTIGLTQ SLKALGNKVC ACIRQPSMGP VFGVKGGAAG GGYAQVVPMQ 120
  121 ELNLHLTGDI HAVSSAHNLG AAAIASRLYH EMRLGKAEFE RQSGLSYLDI DPKGIRWHRV 180
  181 VDHNDRCLRE IEVGLGENNG PAYTSGFDIT AASELMAILA LSRNLTDMRV RIGKLVLALN 240
  241 RQGEAVSADE LGVAGAMTAI MADAVKPTLM QTLNGAPCLI HAGPFANIAH GNSSVIADDI 300
  301 ALKLADFVVT EGGFGSDMGF EKFCNIKARQ SGLIPSAAVL VTTLKALKAN SGLASDTDIN 360
  361 APDQARLEAG FANLNWHINN VVQYGLPVVV AINRFASDTD AELNWLMEAV RGTAAFGCEL 420
  421 SEAFSQGEDG AMALAQTVIR ACEQPSEFRL LYPDNMELEA KLSTLAELGY GAAGINLSAV 480
  481 AKQQLQELSA LGYAHLPVCM AKTPLSISHD PQLKGVPQGF IVPVRELVLN AGAGFITALV 540
  541 GNVMTMPGLG LTPGYLKIDI DVDGEIIGLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..570] PSI-BLAST 1000.0 Formyltetrahydrofolate synthetase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.64537357529343 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.51683451033161 bayes_pls_golite062009
  • DNA binding
    		•  2.12258000781149 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.09345198747025 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • transcription factor activity
    		•  0.887108427603557 bayes_pls_golite062009
  • protein binding
    		•  0.170837278876362 bayes_pls_golite062009
  • nucleobase, nucleoside, nucleotide kinase activity
    		•  0.12351419478929 bayes_pls_golite062009
  • nucleotide binding
    		•  0.114848452385726 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0915913646217636 bayes_pls_golite062009
  • helicase activity
    		•  0.0775311459068899 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.66

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle