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Protein Overview: gi|24372036, gi|...

General Information:
Name(s) found: gi|24372036 [NCBI NR]
gi|24345908 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24372036|ref|NP_716078.1| phosphoribosylamine--glycine ligase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345908|gb|AAN53523.1|AE015493_1 phosphoribosylamine--glycine ligase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 432 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: purine ribonucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: phosphoribosylamine-glycine ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLVIGGGG REHALAWKAA QSAQVDTVYV APGNAGTALE PNIENVDISA TDIPALIDFA  60
   61 KINQIELTIV GPEAPLVLGV VDAFNAAGLP IFGPTKAAAQ LEGSKAFTKD FLARHNIPTA 120
  121 GYKNCTEISD AKAFVRELTA TTGYPVVIKA DGLAAGKGVI IAQDQAEADA AIDDMLAGNK 180
  181 FGDAGSRVVI EEFLKGEEAS FIVMVDGKNI LAMATSQDHK ARDNADHGPN TGGMGAYSPA 240
  241 PVVTQSVHDW TIANVIRPTV DGMAAEGNVY TGFLYAGLMI APDGSAKVLE YNCRFGDPET 300
  301 QPIMMRLKSD LVELCLAATR GELDKVTAEY DERAAVGVVL AAGGYPDEYR KGDVIDGLSL 360
  361 GNHDAKVFHA GTEMKGGHVV TNGGRVLCAT ALGNTVTEAQ KAAYQLVDEI HWDDVYFRTD 420
  421 IGYRAIAREQ QG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..432] PSI-BLAST 110.0 Glycinamide ribonucleotide synthetase (GAR-syn), C-domain; Glycinamide ribonucleotide synthetase (GAR-syn), N-domain; Glycinamide ribonucleotide synthetase (GAR-syn), domain 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming carbon-nitrogen bonds
    		•  2.70117427678868 bayes_pls_golite062009
  • catalytic activity
    		•  2.5009559386228 bayes_pls_golite062009
  • ligase activity
    		•  2.47642734831155 bayes_pls_golite062009
  • carbamoyl-phosphate synthase activity
    		•  2.44033380004582 bayes_pls_golite062009
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  2.37684773430084 bayes_pls_golite062009
  • phosphoribosylaminoimidazole carboxylase activity
    		•  1.50894988737279 bayes_pls_golite062009
  • phosphoribosylamine-glycine ligase activity
    		•  1.37477732460326 bayes_pls_golite062009
  • carbon-nitrogen ligase activity, with glutamine as amido-N-donor
    		•  1.11645327303429 bayes_pls_golite062009
  • binding
    		•  0.775987463779474 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.351267830197198 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  0.0110559959379195 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle