YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24372019, gi|...

General Information:
Name(s) found: gi|24372019 [NCBI NR]
gi|24345883 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24372019|ref|NP_716061.1| pyruvate dehydrogenase subunit E1 [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345883|gb|AAN53506.1|AE015490_7 pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 888 amino acids

    Gene Ontology:
    Cellular Component: cytosolic pyruvate dehydrogenase complex [ISSLink to PubMed article]
    Biological Process: acetyl-CoA biosynthetic process from pyruvate [ISSLink to PubMed article]
    Molecular Function: pyruvate dehydrogenase (acetyl-transferring) activity [ISSLink to PubMed article]
    pyruvate dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEDMLQDVD PLETQEWVDA LQAVLEQEGP ERAHFLLEKL IDKARRNGTH LPYNATTAYL  60
   61 NTIPAGQEPH MPGNQEMERR IRAIIRWNAL AMVLRGSKKD LELGGHISSF ASSATIYDVC 120
  121 FNHFFRGPNE KDGGDLVYFQ GHIAPGIYAR SFLEGRLSED QLANFRQEVD GKGLSSYPHP 180
  181 KLMPDYWQFP TVSMGLGPIQ AIYQARFLKY LTDRGLKDCS AQTVYCFLGD GECDEPEALG 240
  241 AIGLAAREEL DNLVFIVNCN LQRLDGPVRG NGKIIQELEG EFRGAGWEVV KVIWGRYWDP 300
  301 LLARDTSGKL LQLMEETVDG EYQNCKAKGG AYTREHFFGK YPETAEMVAN MSDDDIWRLN 360
  361 RGGHDPVKVY AALDHAQKTK GRPTVILAKT VKGYGLGDAG EGKNIAHNVK KMGIESIRYF 420
  421 RDRFNIPIPD DQLEDLPFYH PGPDSEEVKY MMSRRAALHG SVPQRREKFS EELEVPSLKI 480
  481 FDSILQGSNG REISSTMAFV RVLTALLKDK KIGKNIVPII PDEARTFGME GLFRQVGIYA 540
  541 HEGQKYVPQD SDQVAYYRED KTGQVLQEGI NELGAMSSWV AAATSYSVND TPMIPFYIYY 600
  601 SMFGFQRIGD MAWAAGDMRA RGFLVGGTSG RTTLNGEGLQ HQDGHSHVLA NTIPNCITYD 660
  661 PTYGYEIAVV VQDGIRRMYG EKQEDIFYYL TTMNENYIQP EMPEGAEEGI VKGIYKLETV 720
  721 SGSGKGKVQL LSCGTILEQT RKAAQALAKD FGITADVFSV TSFNELTRDG QAVERWNMLH 780
  781 PTQTPKQAYI SQVISSDAPA IAATDYMKIY GEQLRAFMPT DYKVLGTDGF GRSDSRDNLR 840
  841 HHFEVDAKFI VIAALKSLVD RKELPVDVLA NAIKEYGIDA DKINPQYA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..888] PSI-BLAST 1000.0 No description for 2qtaA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pyruvate dehydrogenase activity
    		•  11.3856674722026 bayes_pls_golite062009
  • pyruvate dehydrogenase (acetyl-transferring) activity
    		•  11.0549577473177 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
    		•  10.8180381281695 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  4.89064211833637 bayes_pls_golite062009
  • catalytic activity
    		•  2.25537597692103 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  2.23839303410623 bayes_pls_golite062009
  • acetolactate synthase activity
    		•  1.59303412812463 bayes_pls_golite062009
  • transketolase activity
    		•  1.53492491341322 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.723020204729919 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.459800433209317 bayes_pls_golite062009
  • transferase activity
    		•  0.413024577830522 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle