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Protein Overview: UBX4_YEAST

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..126] deduced N/A No confident structure predictions are available.
2 View Details [127..225] MSA 3.117997 View MSA. No confident structure predictions are available.
3 View Details [226..416] PSI-BLAST 17.522879 p47

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 2.11588141989606 bayes_pls_golite062009
  • protein binding
  • 1.75262085947538 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 1.64626529520014 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 1.03640529353043 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 0.778769490362734 bayes_pls_golite062009
  • nucleic acid binding
  • 0.406724367405638 bayes_pls_golite062009
  • hydrolase activity
  • 0.266557627363523 bayes_pls_golite062009
  • DNA binding
  • 0.102021710653816 bayes_pls_golite062009
  • transcription regulator activity
  • 0.0672274772804511 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
  • 2.19381585790185 bayes_pls_golite062009
  • protein binding
  • 1.89134588490127 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 1.83465130904364 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 1.16468510691469 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 0.919595189902044 bayes_pls_golite062009
  • nucleic acid binding
  • 0.383121378043805 bayes_pls_golite062009
  • hydrolase activity
  • 0.247201449341942 bayes_pls_golite062009
  • DNA binding
  • 0.0840213088061073 bayes_pls_golite062009
  • transcription regulator activity
  • 0.0485636215870291 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle