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Protein Overview: TBS1_YEAST

General Information:
Name(s) found: TBS1_YEAST [Swiss-Prot]
Description(s) found:
  • Uncharacterized transcriptional regulatory protein TBS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TBS1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 1094 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMDSGITSS HGSMDKTQKQ SSEWAANQKH NQRVENTRVL MGPAVPAMPP VPSNFPPVPT  60
   61 GTIMSPQLSP FPDHRLRHHP LAHMMPADKN FLAYNMESFK SRVTKACDYC RKRKIRCTEI 120
  121 EPISGKCRNC IKYNKDCTFH FHEELKRRRE EALNNKGNGK SVKKPRLDKE NKFKDENFDI 180
  181 AVRSRNTSST DSSPKLHTNL SQEYIGVSAG KSASDKEDTW PDFVPIDRTV LEKIELNHTK 240
  241 VAGKVFVLEE ICKNMKGTIE KLAEKSKIDV IDKEYMKRPK RKQYSKALLT KQKMFHFRQN 300
  301 VLSHLTDEEF LSPINEMFTT TFKYSILQTK LVLDFSFRSA SSPSSDNILY PLPRLAIAKR 360
  361 LLKNIKCPSL ASLLHIVDVD QCLQFADVHF DPAKGRLTSS QAFLLNICLC LGATVTNFEE 420
  421 KQELVDEDNH ETYYFEKFEL WRLRSFTFLN SVYYYHKLSV ARADMTALKA LLLLAKFAQQ 480
  481 KISASSAVKV LSVAIKVALD LRLNLHSTYE DLELDEIIKR RRLWCYCFST DKFFSVVLSR 540
  541 PPFLKEENTD VLTDESYVEL FRDKILPNLS IKYDDSKLEG VKDIVSVVNL LANHLEYVPY 600
  601 IQSYFLSRLS LIESQIYYSC FSIRTTLDDT LDEIIENVLE NQKALDRMRD DLPTILSLEN 660
  661 YKENMRILSL DSSKLDFEVS CCTTILLHLR WYHQKITLSL FVISIIGDNL DQRESSRHDI 720
  721 AEIIRRSRLD FKRNCIEVLN ILKDFEYYPT VQNEFLYFSL TTVFSMFLYL SEIMVNDEHA 780
  781 METGYIIGLL RDTHTRMLGS EERCLSVHNL KWQTSLFFYT FFLRSTMEKF NLTSKYAKFY 840
  841 AFDSNYYEGV LNRLVKHTRE SKDDMVELLK TSFINKEKMA AFGSFVTEDQ EKMEVSFNIF 900
  901 NEITIQDLNF LQFSSIPKLW ENKTLEPGEE YHHSNGTNTD NNETTGADDT DDNNNNNNNN 960
  961 NKNGNNSSST INNNNNNYSN SNNNDNDNNI NDDDDDDDDD DDDDDDDDDD DDNDDDYSNN1020
 1021 GADDDEEDDD YDRSLFPTGL ASLLDASYPE RTANDYRDEN EQSNKLFEKI EGHLEHGVFF1080
 1081 YDRDFFFKNV CVKM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..57] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [58..178] PSI-BLAST 44.512579 CD2-Lac9
    3 View Details [179..338] deduced N/A No confident structure predictions are available.
    4 View Details [339..624] MSA 5.096995 View MSA. No confident structure predictions are available.
    5 View Details [625..915] deduced N/A No confident structure predictions are available.
    6 View Details [916..975] ORFEUS 7.16 No description for 1l8mA was found.
    7 View Details [976..1094] ORFEUS 7.16 No description for 1l8mA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nucleic acid binding
    		•  2.55832554210202 bayes_pls_golite062009
  • DNA binding
    		•  2.48009340951204 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.39344671016496 bayes_pls_golite062009
  • binding
    		•  2.32645838605286 bayes_pls_golite062009
  • transcription factor activity
    		•  1.25308658158845 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.75311920044374 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.68524247899289 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.53107237892739 bayes_pls_golite062009
    3
    Term Confidence Notes
  • nucleic acid binding
    		•  2.36440811505803 bayes_pls_golite062009
  • DNA binding
    		•  2.25848660128916 bayes_pls_golite062009
  • binding
    		•  2.23525969523197 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.17762225700059 bayes_pls_golite062009
  • transcription factor activity
    		•  1.07713564675134 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.523017357555093 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.479128525355337 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.176810808981692 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle