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Protein Overview: HOP1_YEAST

General Information:
Name(s) found: HOP1_YEAST [Swiss-Prot]
Description(s) found:
  • Meiosis-specific protein HOP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOP1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKQLVKPK TETKTEITTE QSQKLLQTML TMSFGCLAFL RGLFPDDIFV DQRFVPEKVE  60
   61 KNYNKQNTSQ NNSIKIKTLI RGKSAQADLL LDWLEKGVFK SIRLKCLKAL SLGIFLEDPT 120
  121 DLLENYIFSF DYDEENNVNI NVNLSGNKKG SKNADPENET ISLLDSRRMV QQLMRRFIII 180
  181 TQSLEPLPQK KFLTMRLMFN DNVDEDYQPE LFKDATFDKR ATLKVPTNLD NDAIDVGTLN 240
  241 TKHHKVALSV LSAATSSMEK AGNTNFIRVD PFDLILQQQE ENKLEESVPT KPQNFVTSQT 300
  301 TNVLGNLLNS SQASIQPTQF VSNNPVTGIC SCECGLEVPK AATVLKTCKS CRKTLHGICY 360
  361 GNFLHSSIEK CFTCIFGPSL DTKWSKFQDL MMIRKVFRFL VRKKKGFPAS ITELIDSFIN 420
  421 VEDQNNEVKE RVAFALFVFF LDETLCLDNG GKPSQTIRYV TSSVLVDVKG IVIPNTRKQL 480
  481 NVNHEYKWHF TTSSPKAESF YQEVLPNSRK QVESWLQDIT NLRKVYSEAL SPSSTLQELD 540
  541 LNSSLPTQDP IISGQKRRRY DLDEYLEEDK SSVVNDTIKA KDFDESVPAK IRKISVSKKT 600
  601 LKSNW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 44.0 The spindle assembly checkpoint protein mad2
    2 View Details [298..362] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [363..605] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.13055115474904 bayes_pls_golite062009
  • protein binding
    		•  0.818584450437447 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  2.84147289283175 bayes_pls_golite062009
  • histone binding
    		•  2.18177552065219 bayes_pls_golite062009
  • protein binding
    		•  1.32925779020231 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.0641566670887 bayes_pls_golite062009
  • DNA binding
    		•  0.971448192185972 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  0.967231932888801 bayes_pls_golite062009
  • chromatin binding
    		•  0.880691867408093 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.853862782088463 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  0.831882636066806 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  0.831882636066806 bayes_pls_golite062009
  • methylated histone residue binding
    		•  0.635303636820801 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.592444465044507 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.326699327690106 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
    		•  0.290550172892431 bayes_pls_golite062009
  • DNA helicase activity
    		•  0.290236218269237 bayes_pls_golite062009
  • transcription factor activity
    		•  0.0935432513162235 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle