YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: HEK2_YEAST

General Information:
Name(s) found: HEK2_YEAST [Swiss-Prot]
Description(s) found:
  • Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HEK2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 381 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQFFEAATP VAIPTNNTNG GSSDAGSAAT GGAPVVGTTA QPTINHRLLL SLKEAAKIIG  60
   61 TKGSTISRIR AANAVKIGIS EKVPGCSDRI LSCAGNVINV ANAIGDIVDV LNKRNPENED 120
  121 AAEGEAEEHY YFHFLNHILP APSKDEIRDL QQLEDIGYVR LIVANSHISS IIGKAGATIK 180
  181 SLINKHGVKI VASKDFLPAS DERIIEIQGF PGSITNVLIE ISEIILSDVD VRFSTERSYF 240
  241 PHLKKSSGEP TSPSTSSNTR IELKIPELYV GAIIGRGMNR IKNLKTFTKT NIVVERKDDD 300
  301 DKDENFRKFI ITSKFPKNVK LAESMLLKNL NTEIEKRENY KRKLEAAEGD ATVVTERSDS 360
  361 ASFLEEKEEP QENHDNKEEQ S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..42]
    [165..238]    		 PSI-BLAST 36.30103 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5
    2 View Details [43..164]
    [239..381]    		 PSI-BLAST 36.30103 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; S1 RNA-binding domain of polyribonucleotide phosphorylase, PNPase; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.9432182987214 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  3.63349555627235 bayes_pls_golite062009
  • structural molecule activity
    		•  3.43604616110432 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.14875774646095 bayes_pls_golite062009
  • binding
    		•  1.9759530321894 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.69410216708845 bayes_pls_golite062009
  • DNA binding
    		•  1.688021219058 bayes_pls_golite062009
  • deacetylase activity
    		•  1.09789613642093 bayes_pls_golite062009
  • exonuclease activity
    		•  1.02947145936572 bayes_pls_golite062009
  • transcription termination factor activity
    		•  1.01912880224809 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  0.96549462572212 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.75307991342421 bayes_pls_golite062009
  • protein binding
    		•  0.523813050066193 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.499351238958464 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  0.48105441429954 bayes_pls_golite062009
  • 3'-5' exonuclease activity
    		•  0.477960254167 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  0.36703663415044 bayes_pls_golite062009
  • exoribonuclease activity
    		•  0.350394896843651 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.337324481645901 bayes_pls_golite062009
  • DNA-(apurinic or apyrimidinic site) lyase activity
    		•  0.288026663667102 bayes_pls_golite062009
  • RNA binding
    		•  0.24714225183821 bayes_pls_golite062009
  • kinase activity
    		•  0.237670019875888 bayes_pls_golite062009
  • damaged DNA binding
    		•  0.16864489654021 bayes_pls_golite062009
  • catalytic activity
    		•  0.10089766806364 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.0869020377778909 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.0193674670513169 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle