Protein Overview: CBF1_YEAST

General Information:
Name(s) found:	CBF1_YEAST [Swiss-Prot]
Description(s) found:	Centromere-binding protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CBF1 PE=1 SV=2 [Swiss-Prot]
Organism:	Saccharomyces cerevisiae S288c
Length:	351 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLANNNKL STEDEEIHSA RKRGYNEEQN YSEARKKQRD QGLLSQESND GNIDSALLSE  60
   61 GATLKGTQSQ YESGLTSNKD EKGSDDEDAS VAEAAVAATV NYTDLIQGQE DSSDAHTSNQ 120
  121 TNANGEHKDS LNGERAITPS NEGVKPNTSL EGMTSSPMES TQQSKNDMLI PLAEHDRGPE 180
  181 HQQDDEDNDD ADIDLKKDIS MQPGRRGRKP TTLATTDEWK KQRKDSHKEV ERRRRENINT 240
  241 AINVLSDLLP VRESSKAAIL ACAAEYIQKL KETDEANIEK WTLQKLLSEQ NASQLASANE 300
  301 KLQEELGNAY KEIEYMKRVL RKEGIEYEDM HTHKKQENER KSTRSDNPHE A

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..168]	deduced	N/A	No confident structure predictions are available.
2	View Details	[169..351]	PSI-BLAST	11.522879	Max protein

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
transcription regulator activity	5.38658950816179	bayes_pls_golite062009
DNA binding	5.18654839258297	bayes_pls_golite062009
nucleic acid binding	5.05768805749761	bayes_pls_golite062009
transcription factor activity	4.78039531631248	bayes_pls_golite062009
transcription activator activity	3.87875547821718	bayes_pls_golite062009
binding	3.81829206350975	bayes_pls_golite062009
sequence-specific DNA binding	3.42035985454056	bayes_pls_golite062009
protein binding	2.64975291677725	bayes_pls_golite062009
transcription factor binding	2.61163564741984	bayes_pls_golite062009
RNA polymerase II transcription factor activity, enhancer binding	2.58879320178546	bayes_pls_golite062009
transcription repressor activity	2.58751248599889	bayes_pls_golite062009
RNA polymerase II transcription factor activity	2.48787404513864	bayes_pls_golite062009
transcription corepressor activity	2.03674713048499	bayes_pls_golite062009
transcription cofactor activity	1.52770895937238	bayes_pls_golite062009
promoter binding	0.94414084000081	bayes_pls_golite062009
protein heterodimerization activity	0.53175615551166	bayes_pls_golite062009
transcription coactivator activity	0.3513586903977	bayes_pls_golite062009
protein dimerization activity	0.20674648626116	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle