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Protein Overview: APC5_YEAST

General Information:
Name(s) found: APC5_YEAST [Swiss-Prot]
Description(s) found:
  • Anaphase-promoting complex subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APC5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 685 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKYGPLGIT NFITPYDLCI LILIHAHCSQ DNGISVPTAV FLRLISPTRP SLEWNPLLKD  60
   61 NSNLRSSSIV PPPVLPILDN IIRILLDDKD GNKIALTLMG YLEAINGLDS INRLMMDLEK 120
  121 NCLVNNYRSM KMRTTSTRRQ MTRASFLGTF LSTCIRKYQI GDFEMRETIW INLQNFKTVF 180
  181 KHTPLWLRFK DNVHIQKVKN CLLANDEISV EDQQMVEFFQ HFNNGNDADS KTMNEENYGT 240
  241 LISIQHLQSI VNRQIVNWLD NTEFNLMGQE ETSSTYEEQS GLVFDLLDTL SLNDATKFPL 300
  301 IFILKYLEAI KENSYQTALD SLHNYFDYKS TGNSQNYFHI SLLSLATFHS SFNECDAAIN 360
  361 SFEEATRIAR ENKDMETLNL IMIWIINFIE VHPEYANRFY ITVEQIIKYL KNSSDVEDAN 420
  421 IFSNAYKFET LLSMVKESKT AEVSSSLLKF MAITLQNVPS QNFDLFQSLV SYEVKFWKEL 480
  481 GYESISDVYE KFLSKTSSSS LRNYDSSIIN QDIKVAFKAL EEDDFLKVKQ YLLKSESLEL 540
  541 DYDQKINLKY LRVKYLVKIG DYDLSMRLIN QYVKECCEEV ADSNWRFKFE IESINVLLLS 600
  601 DVGIRSLPKI IKLIDEYKEI GNPLRCVILL LKLCEVLIQV GKSMEAECLI SCNLSTILEF 660
  661 PFVRKKTDEL LESLSVEEDR DVQMT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] MSA 1.00996 View MSA. No confident structure predictions are available.
    2 View Details [224..282] deduced N/A No confident structure predictions are available.
    3 View Details [283..385] ORFEUS 9.5 Transcription factor MalT domain III
    4 View Details [386..512] ORFEUS 9.5 Transcription factor MalT domain III
    5 View Details [513..685] ORFEUS 9.5 Transcription factor MalT domain III

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ubiquitin-protein ligase activity
    		•  6.60409233943418 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  6.34821407430872 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  5.66913998827366 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  4.89633630562107 bayes_pls_golite062009
  • binding
    		•  2.50062202757362 bayes_pls_golite062009
  • ligase activity
    		•  1.73009430374312 bayes_pls_golite062009
  • protein binding
    		•  1.72061787550863 bayes_pls_golite062009
  • hydrolase activity
    		•  0.63851966218836 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.437277381081288 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.198767743012145 bayes_pls_golite062009
  • DNA binding
    		•  0.186035324819401 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle