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Protein Overview: gi|145338120, gi...

General Information:
Name(s) found: gi|61742699 [NCBI NR]
gi|52354299 [NCBI NR]
gi|145338120 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|61742699|gb|AAX55170.1| hypothetical protein At3g04820 [Arabidopsis thaliana] [NCBI NR]
  • gi|52354299|gb|AAU44470.1| hypothetical protein AT3G04820 [Arabidopsis thaliana] [NCBI NR]
  • gi|145338120|ref|NP_187133.3| pseudouridine synthase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 715 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pseudouridine synthesis [IEA]
    tRNA pseudouridine synthesis [IEA]
    tRNA processing [IEA]
    Molecular Function: pseudouridine synthase activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSRTVLSC LPSLLKPYSS LSWTTKIATI ATNFEGMKTV DEADVGISCF ISQLPGFRGI  60
   61 LKQRYADFIV NEVDMDGNVV HLTSLDLPPE MAVKEEDKAK SCDNVPQNYT SAVESFKSIS 120
  121 SVTDAERLEI LINQVTSGTD GEVLPVVLDP SSDKSKRTAI HNFVKENFKF LVTDTVDGPD 180
  181 STSKCIRVRV NSGANNNRGN RSKKRKERGD KPFDSRGSEH WPEHVGKFLR FHLYKENKDT 240
  241 QEALGLIGKM LGVQPKSFGF SGTKDKRSVS TQRVTVFKQQ ASKLAALNKR LFGIKVGDFC 300
  301 NVKEGLLLGQ LMGNRFTITL RGVVADSEET IKQSAESLGK DGFINYFGLQ RFGSGSVPTH 360
  361 HVGAALLKGE WKDAVDMILD PRETERHVVN DAREYYKETG DIDGTLRQLP RYLVAERAIL 420
  421 QCLKKCPGNY LQALKGIPRT LRMMYVHSYQ SYLWNNAASL RVKNYGTSQV VLGDLVSTKV 480
  481 DAAKRMVDSL TSEHNESSEE ALDCDQVDDT AVVDLPAERS DLVKVVSIED LEAGTYSTSD 540
  541 IVLPLPGSRV IYPSNDIAEI YHDLAKKDGI SLTESIHGVK EFSITSMTGG YRRVFQKPID 600
  601 FEWELLTYTD SNKPLAETDL DRIPMNKPVE KVGSTEEIED ESMKSDTNPH DSGETNLKDQ 660
  661 TDSNEAEKDT GNPDSEQTQM ALKMALTLPS SCYATMAIRE LLKTSTSVAY HKTLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] MSA 2.066991 View MSA. No confident structure predictions are available.
    2 View Details [182..715] PSI-BLAST 82.09691 Crystal Structure of the Putative tRNA pseudouridine synthase D (TruD) from Methanosarcina mazei, Northeast Structural Genomics Target MaR1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle