YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145338120, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSRTVLSC LPSLLKPYSS LSWTTKIATI ATNFEGMKTV DEADVGISCF ISQLPGFRGI  60
   61 LKQRYADFIV NEVDMDGNVV HLTSLDLPPE MAVKEEDKAK SCDNVPQNYT SAVESFKSIS 120
  121 SVTDAERLEI LINQVTSGTD GEVLPVVLDP SSDKSKRTAI HNFVKENFKF LVTDTVDGPD 180
  181 STSKCIRVRV NSGANNNRGN RSKKRKERGD KPFDSRGSEH WPEHVGKFLR FHLYKENKDT 240
  241 QEALGLIGKM LGVQPKSFGF SGTKDKRSVS TQRVTVFKQQ ASKLAALNKR LFGIKVGDFC 300
  301 NVKEGLLLGQ LMGNRFTITL RGVVADSEET IKQSAESLGK DGFINYFGLQ RFGSGSVPTH 360
  361 HVGAALLKGE WKDAVDMILD PRETERHVVN DAREYYKETG DIDGTLRQLP RYLVAERAIL 420
  421 QCLKKCPGNY LQALKGIPRT LRMMYVHSYQ SYLWNNAASL RVKNYGTSQV VLGDLVSTKV 480
  481 DAAKRMVDSL TSEHNESSEE ALDCDQVDDT AVVDLPAERS DLVKVVSIED LEAGTYSTSD 540
  541 IVLPLPGSRV IYPSNDIAEI YHDLAKKDGI SLTESIHGVK EFSITSMTGG YRRVFQKPID 600
  601 FEWELLTYTD SNKPLAETDL DRIPMNKPVE KVGSTEEIED ESMKSDTNPH DSGETNLKDQ 660
  661 TDSNEAEKDT GNPDSEQTQM ALKMALTLPS SCYATMAIRE LLKTSTSVAY HKTLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle