| Protein: | gi|145338120, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 715 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|145338120, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
765.0 | [0..1] | [712..1] |
|
|
555.0 | [0..38] | [715..158] |
|
|
552.0 | [0..38] | [715..85] |
|
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551.0 | [0..38] | [715..173] |
|
|
551.0 | [0..38] | [715..96] |
|
|
551.0 | [0..38] | [715..102] |
|
Region A: Residues: [1-181] |
1 11 21 31 41 51
| | | | | |
1 MKLSRTVLSC LPSLLKPYSS LSWTTKIATI ATNFEGMKTV DEADVGISCF ISQLPGFRGI 60
61 LKQRYADFIV NEVDMDGNVV HLTSLDLPPE MAVKEEDKAK SCDNVPQNYT SAVESFKSIS 120
121 SVTDAERLEI LINQVTSGTD GEVLPVVLDP SSDKSKRTAI HNFVKENFKF LVTDTVDGPD 180
181 S
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [182-715] |
1 11 21 31 41 51
| | | | | |
1 TSKCIRVRVN SGANNNRGNR SKKRKERGDK PFDSRGSEHW PEHVGKFLRF HLYKENKDTQ 60
61 EALGLIGKML GVQPKSFGFS GTKDKRSVST QRVTVFKQQA SKLAALNKRL FGIKVGDFCN 120
121 VKEGLLLGQL MGNRFTITLR GVVADSEETI KQSAESLGKD GFINYFGLQR FGSGSVPTHH 180
181 VGAALLKGEW KDAVDMILDP RETERHVVND AREYYKETGD IDGTLRQLPR YLVAERAILQ 240
241 CLKKCPGNYL QALKGIPRTL RMMYVHSYQS YLWNNAASLR VKNYGTSQVV LGDLVSTKVD 300
301 AAKRMVDSLT SEHNESSEEA LDCDQVDDTA VVDLPAERSD LVKVVSIEDL EAGTYSTSDI 360
361 VLPLPGSRVI YPSNDIAEIY HDLAKKDGIS LTESIHGVKE FSITSMTGGY RRVFQKPIDF 420
421 EWELLTYTDS NKPLAETDLD RIPMNKPVEK VGSTEEIEDE SMKSDTNPHD SGETNLKDQT 480
481 DSNEAEKDTG NPDSEQTQMA LKMALTLPSS CYATMAIREL LKTSTSVAYH KTLN
|
| Detection Method: | |
| Confidence: | 82.09691 |
| Match: | 1z2zA |
| Description: | Crystal Structure of the Putative tRNA pseudouridine synthase D (TruD) from Methanosarcina mazei, Northeast Structural Genomics Target MaR1 |
Matching Structure (courtesy of the PDB): |
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