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Protein Overview: SC31B_ARATH

General Information:
Name(s) found: SC31B_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Protein transport protein SEC31 homolog B OS=Arabidopsis thaliana GN=SEC31B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1104 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: NONE FOUND
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE  60
   61 IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN PLSLIGSQPS ENALVGHLSV 120
  121 HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKPSEPSH FPLLKGSGSA TQGEISFISW 180
  181 NRKVQQILAS TSYNGTTVIW DLRKQKPIIN FADSVRRRCS VLQWNPNVTT QIMVASDDDS 240
  241 SPTLKLWDMR NIMSPVREFT GHQRGVIAME WCPSDSSYLL TCAKDNRTIC WDTNTAEIVA 300
  301 ELPAGNNWNF DVHWYPKIPG VISASSFDGK IGIYNIEGCS RYGVEENNFG TAPLKAPKWY 360
  361 KRPVGASFGF GGKLVSCHAR APAKGTSSIL SEVFLHSLVT EQSLVSRTSE FEAAIENGDM 420
  421 TSLRGLCEKK SEETESEEEK ETWGLLKIMF EEEGTSRTKL ISHLGFTLPV AEKDQAVDGL 480
  481 SSDLNGIRLE DTAADALDLD DSNEAAAFAM DNGEDFFNNF PAKPDTPVST SAKDFMPSDT 540
  541 DFSTKGEETQ EMQEEEEESS DPVFDNAIQR ALIVGDYKEA VDQCITANKM ADALVIAHVG 600
  601 GTALWESTRE KYLKTSSAPY MKVVSAMVNN DLRSLIYTRS HKFWKETLAL LCTFAQGEQW 660
  661 TTLCDALASK LMAAGNTLAA VLCYICAGNV DRTVEIWSRS LANERDGRSY AELLQDLMEK 720
  721 TLVLALATGN KKFSASLCKL FESYAEILAS QGLLTTAMKY LKVLDSGGLS PELSILRDRI 780
  781 SLSAEPETNT TASGNTQPQS TMPYNQEPTQ AQPNVLANPY DNQYQQPYTD SYYVPQVSHP 840
  841 PMQQPTMFMP HQAQPAPQPS FTPAPTSNAQ PSMRTTFVPS TPPALKNADQ YQQPTMSSHS 900
  901 FTGPSNNAYP VPPGPGQYAP SGPSQLGQYP NPKMPQVVAP AAGPIGFTPM ATPGVAPRSV 960
  961 QPASPPTQQA AAQAAPAPAT PPPTVQTADT SNVPAHQKPV IATLTRLFNE TSEALGGARA1020
 1021 NTTKKREIED NSRKLGALFV KLNSGDISKN AADKLAQLCQ ALDNNDFSTA LQIQVLLTTS1080
 1081 EWDECNFWLA TLKRMMVKAR QNVR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 49.0 No description for 2pm9A was found.
    2 View Details [156..556] PSI-BLAST 6.0 Surface layer protein
    3 View Details [557..728] FFAS03 4.95 No description for 2pm6A was found.
    4 View Details [729..1025] PSI-BLAST 5.30103 No description for 1y0fA was found.
    5 View Details [1026..1104] PSI-BLAST 4.39794 poly(A) binding protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.58

    Source: Reynolds et al. (2008)

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