| Protein: | SC31B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1104 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SC31B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
729.0 | [0..1] | [1104..1] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MACIKGVGRS ASVALAPDAP YMAAGTMAGA VDLSFSSSAN LEIFKLDFQS DDRDLPLVGE 60
61 IPSSERFNRL AWGRNGSGSE EFALGLIAGG LVDGNIDLWN PLSLIGSQPS ENALVGHLSV 120
121 HKGPVRGLEF NAISSNLLAS GADDGEICIW DLLKP
|
| Detection Method: |  |
| Confidence: | 49.0 |
| Match: | 2pm9A |
| Description: | No description for 2pm9A was found. |
|
Region A: Residues: [156-556] |
1 11 21 31 41 51
| | | | | |
1 SEPSHFPLLK GSGSATQGEI SFISWNRKVQ QILASTSYNG TTVIWDLRKQ KPIINFADSV 60
61 RRRCSVLQWN PNVTTQIMVA SDDDSSPTLK LWDMRNIMSP VREFTGHQRG VIAMEWCPSD 120
121 SSYLLTCAKD NRTICWDTNT AEIVAELPAG NNWNFDVHWY PKIPGVISAS SFDGKIGIYN 180
181 IEGCSRYGVE ENNFGTAPLK APKWYKRPVG ASFGFGGKLV SCHARAPAKG TSSILSEVFL 240
241 HSLVTEQSLV SRTSEFEAAI ENGDMTSLRG LCEKKSEETE SEEEKETWGL LKIMFEEEGT 300
301 SRTKLISHLG FTLPVAEKDQ AVDGLSSDLN GIRLEDTAAD ALDLDDSNEA AAFAMDNGED 360
361 FFNNFPAKPD TPVSTSAKDF MPSDTDFSTK GEETQEMQEE E
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1l0qA |
| Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [557-728] |
1 11 21 31 41 51
| | | | | |
1 EESSDPVFDN AIQRALIVGD YKEAVDQCIT ANKMADALVI AHVGGTALWE STREKYLKTS 60
61 SAPYMKVVSA MVNNDLRSLI YTRSHKFWKE TLALLCTFAQ GEQWTTLCDA LASKLMAAGN 120
121 TLAAVLCYIC AGNVDRTVEI WSRSLANERD GRSYAELLQD LMEKTLVLAL AT
|
| Detection Method: | |
| Confidence: | 4.95 |
| Match: | 2pm6A |
| Description: | No description for 2pm6A was found. |
|
Region A: Residues: [729-1025] |
1 11 21 31 41 51
| | | | | |
1 GNKKFSASLC KLFESYAEIL ASQGLLTTAM KYLKVLDSGG LSPELSILRD RISLSAEPET 60
61 NTTASGNTQP QSTMPYNQEP TQAQPNVLAN PYDNQYQQPY TDSYYVPQVS HPPMQQPTMF 120
121 MPHQAQPAPQ PSFTPAPTSN AQPSMRTTFV PSTPPALKNA DQYQQPTMSS HSFTGPSNNA 180
181 YPVPPGPGQY APSGPSQLGQ YPNPKMPQVV APAAGPIGFT PMATPGVAPR SVQPASPPTQ 240
241 QAAAQAAPAP ATPPPTVQTA DTSNVPAHQK PVIATLTRLF NETSEALGGA RANTTKK
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [1026-1104] |
1 11 21 31 41 51
| | | | | |
1 REIEDNSRKL GALFVKLNSG DISKNAADKL AQLCQALDNN DFSTALQIQV LLTTSEWDEC 60
61 NFWLATLKRM MVKARQNVR
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1g9lA |
| Description: | poly(A) binding protein |
Matching Structure (courtesy of the PDB): |
|
