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Protein Overview: gi|22328591, gi|...

General Information:
Name(s) found: gi|30725432 [NCBI NR]
gi|30682446 [NCBI NR]
gi|22328591 [NCBI NR]
gi|17064858 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|30725432|gb|AAP37738.1| At4g13350 [Arabidopsis thaliana] [NCBI NR]
  • gi|30682446|ref|NP_849540.1| NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase [Arabidopsis thaliana] [NCBI NR]
  • gi|22328591|ref|NP_193071.2| NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase [Arabidopsis thaliana] [NCBI NR]
  • gi|17064858|gb|AAL32583.1| putative protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 602 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    cytosol [IDA]
    Biological Process: nucleocytoplasmic transport [IDA]
    response to virus [IMP]
    Molecular Function: GTP binding [IDA]
    GTPase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRVKEDEK NEKIIRSLLK LPENKRCINC NSLGPQYVCT TFWTFVCTNC SGIHREFTHR  60
   61 VKSISMAKFT SQEVTALKEG GNQHAKDIYF KGLDQQRQSV PDGSNVERLR DFIRHVYVNK 120
  121 RYTNEKNDDK SPSETRSSSG SRSPPYEDGY DRRYGDRSSP GGRSPGFETG SRNAVNNRKS 180
  181 PARPEILNDW RREDRFGGRK TSEEGSQSPE QVKDLGSASP PVARPVREIL GDSVIPLRVG 240
  241 EPPKPPVSRN TDASAHAKSG TSLSSLMSTN EKPPEVKLET ALSLIDFDTD FETPAPSVAI 300
  301 QAPLSTTSQP APQPTTSSND NWASFDAAPS APSLNVSQPP PSGNTLDSLL SQLAVTSSVP 360
  361 GQASTPSNGP VNLGHSTSQI FAPFQNEHSS EQPWNTALAS NVQRSMSAPS LQPLQGVPSG 420
  421 GLQSSEVKPS GRSELPADLF AVNYPSYHAP VPGWQAGPPH AMHYGMQQYN NPVPYQNVPQ 480
  481 PGKSMNPFDF SPGPPSQTQT ENMFPSMAPL QGALPPSGMM PSQGVHNQFN IPSQGSAHPS 540
  541 AMPPRYMPSQ IPGSMPPSNV NPIGDINTSY DTQQTYQNFG SSFAAAVPLN PPSFQSGGNP 600
  601 FG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 41.0 Pyk2-associated protein beta; Pyk2-associated protein beta ARF-GAP domain
    2 View Details [214..379] FFAS03 1.58 No description for 2j63A was found.
    3 View Details [380..524] PSI-BLAST 4.69897 Sec24
    4 View Details [525..602] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle