Protein Overview: ENSPTRT00000045693

General Information:
Name(s) found:	ENSPTRT00000045693 [chimp_Ens_120109_contam.fas]
Description(s) found:	[chimp_Ens_120109_contam.fas]
Organism:	Pan troglodytes
Length:	436 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGGSERAD GRIVKMEVDY SATVDQRLPE CAKLAKASDM VSTSRILVAV VKMCYEAKEW  60
   61 DLLNENIMLL SKRRSQLKQA VAKMVQQCCT YVEEITDLPI KLRLIDTLRM VTEGKIYVEI 120
  121 ERARLTKTLA TIKEQNGDVK EAASILQELQ VETYGSMEKK ERVEFILEQM RLCLAVKDYI 180
  181 RTQIISKKIN TKFFQEENTE KLKLKYYNLM IQLDQHEGSY LSICKHYRAI YDTPCIQAES 240
  241 EKWQQALKSV VLYVILAPFD NEQSDLVHRI SGDKKLEEIP KYKDLLKLFT TMELMRWSTL 300
  301 VEDYGMELRK GSLESPATDV FGSTEEGEKR WKDLKNRVVE HNIRIMAKYY TRITMKRMAQ 360
  361 LLDLSVDESE AFLSNLVVNK TIFAKVDRLA GIINFQRPKD PNNLLNDWSQ KLNSLMSLVN 420
  421 KTTHLIAKEE MIHNLQ

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..218]	PSI-BLAST	4.0	Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form)
2	View Details	[219..314]	deduced	N/A	Confident ab initio structure predictions are available.
3	View Details	[315..436]	PSI-BLAST	12.69897	Solution structure of the PCI domain

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

No functions predicted.

3

Term	Confidence	Notes
transcription regulator activity	3.50995556050336	bayes_pls_golite062009
nucleic acid binding	3.38144578566524	bayes_pls_golite062009
binding	3.33026160538031	bayes_pls_golite062009
DNA binding	3.30822066787723	bayes_pls_golite062009
transcription factor activity	2.60537570879007	bayes_pls_golite062009
hydrolase activity	2.30467124306022	bayes_pls_golite062009
structural constituent of ribosome	1.46680509390433	bayes_pls_golite062009
sequence-specific DNA binding	1.32971938164691	bayes_pls_golite062009
transcription activator activity	1.08566311616647	bayes_pls_golite062009
transcription repressor activity	0.95491822926452	bayes_pls_golite062009
general RNA polymerase II transcription factor activity	0.845023110629115	bayes_pls_golite062009
protein binding	0.653872239015235	bayes_pls_golite062009
RNA polymerase II transcription factor activity	0.42135864069093	bayes_pls_golite062009
ubiquitin-protein ligase activity	0.136726704233672	bayes_pls_golite062009
small conjugating protein ligase activity	0.118016217031359	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle