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Protein Overview: LRK64_ARATH

General Information:
Name(s) found: LRK64_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Lectin-domain containing receptor kinase VI.4 OS=Arabidopsis thaliana GN=LECRK64 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 691 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IEP]
    Biological Process: abscisic acid mediated signaling pathway [IMP]
    seed germination [IMP]
    Molecular Function: kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRAKSMVSL LLVLFLVRAH VATTETTTEF IFHGFKGNQS EIHMQGDSTI TSNGLLRLTD  60
   61 RNSDVVGTAF YHKPVRLLDS NSTNTTVRSF STSFIFIIPS SSTSNGGFGF TFTLSPTPNR 120
  121 TDADPEQYMG LLNERNDGNS SNHVFAVEFD TVQGFKDGTN RIGNHIGLNF NSLSSDVQEP 180
  181 VAYFNNNDSQ KEEFQLVSGE PIQVFLDYHG PTKTLNLTVY PTRLGYKPRI PLISREVPKL 240
  241 SDIVVDEMFV GFTAATGRHG QSSAHYVMGW SFASGGEHPL AAMLDISQLP PPPPNKAKKR 300
  301 GYNGKVIALI VALSTVISIM LVLLFLFMMY KKRMQQEEIL EDWEIDHPHR FRYRDLYKAT 360
  361 EGFKENRVVG TGGFGIVYRG NIRSSSDQIA VKKITPNSMQ GVREFVAEIE SLGRLRHKNL 420
  421 VNLQGWCKHR NDLLLIYDYI PNGSLDSLLY SKPRRSGAVL SWNARFQIAK GIASGLLYLH 480
  481 EEWEQIVIHR DVKPSNVLID SDMNPRLGDF GLARLYERGS QSCTTVVVGT IGYMAPELAR 540
  541 NGNSSSASDV FAFGVLLLEI VSGRKPTDSG TFFIADWVME LQASGEILSA IDPRLGSGYD 600
  601 EGEARLALAV GLLCCHHKPE SRPLMRMVLR YLNRDEDVPE IHDNWGYSDS SRTDLGSKLV 660
  661 GYISSDRASS SHSHTSSSLT RISSTSLISG R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..345] PSI-BLAST 22.154902 Legume lectin
    2 View Details [346..691] PSI-BLAST 66.69897 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.40096962515027 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.16616430987996 bayes_pls_golite062009
  • actin binding
    		•  2.0669297251683 bayes_pls_golite062009
  • protein binding
    		•  1.80794638640093 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.67818953913801 bayes_pls_golite062009
  • kinase activity
    		•  1.67164937001078 bayes_pls_golite062009
  • fibroblast growth factor binding
    		•  1.5757435501069 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.57319468996942 bayes_pls_golite062009
  • protein kinase activity
    		•  1.4419983524192 bayes_pls_golite062009
  • transferase activity
    		•  1.33812952885475 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • signal transducer activity
    		•  1.24423621131253 bayes_pls_golite062009
  • receptor activity
    		•  1.19855418474193 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  1.12075545665641 bayes_pls_golite062009
  • transporter activity
    		•  0.883938295782649 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.698240496790323 bayes_pls_golite062009
  • structural molecule activity
    		•  0.591248843231149 bayes_pls_golite062009
  • growth factor binding
    		•  0.504567186763321 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  0.50233763591332 bayes_pls_golite062009
  • hydrolase activity
    		•  0.488963797364099 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.481025719380392 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  0.418250353742262 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.372701974560119 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.339759264844777 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.248374734969893 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.160855218996334 bayes_pls_golite062009
  • DNA binding
    		•  0.157628282318248 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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