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Protein Overview: IRGM_RAT

General Information:
Name(s) found: IRGM_RAT [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Immunity-related GTPase family M protein OS=Rattus norvegicus GN=Irgm PE=2 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 411 amino acids

    Gene Ontology:
    Cellular Component: phagocytic vesicle membrane [IEA]
    cytoplasmic vesicle [IEA]
    Golgi membrane [IEA]
    Golgi apparatus [IEA]
    autophagic vacuole membrane [IEA]
    plasma membrane [IEA]
    Biological Process: autophagy [IEA]
    innate immune response [IEA]
    defense response [UNKNOWN]
    Molecular Function: nucleotide binding [IEA]
    GTP binding [IEA]
    hydrolase activity, acting on acid anhydrides [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPSHKSCEA APLLPKMPET STHNAPLNLS FPSVPSYQIG CSSLPEISRS TERALKEGKL  60
   61 PELVYGVKET VATLSQIPVS IFVTGDSGNG MSSFINALRI IGHEEDASAP TGVVRTTQTR 120
  121 AEYSSSHFPN VVLWDLPGLG ATAQTVENYI EEMKFSTCDL FIIVASEQFS SNHVKLAKII 180
  181 QSMGKRFYVI WTKLDRDLST SVLSEVRLIQ NIQENIRENL QKEGVKEVPI FLVSNLDPLL 240
  241 HDFPELRNTL QTDLSNIRCC EPLKTLYVIY EKIIGDKVAN WNQIIANGRL KSSLGVRDDD 300
  301 DMGECLKRYR LIFGIDDESL QQIAHGMGTV VMEYKANIKS QDFHTLRRAD WKLRLMTCTT 360
  361 VNALFCLFKF LPCLCHCFKR MRHKRMLLLV AKDTKNILKK ILMDAVSPPQ I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle