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Protein Overview: GCS2_ARATH

General Information:
Name(s) found: GCS2_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Alpha-glucosidase 2 OS=Arabidopsis thaliana GN=GCS2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 789 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: oligosaccharide metabolic process [IEA]
    Molecular Function: alpha-glucosidase activity [ISS]
    catalytic activity [IEA]
    mannosyl-oligosaccharide glucosidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGLSPSGDI KPLLDDESQR PRVITPFPSP KLTDLSMFQG EHKESLYWGT YRPQMYFGVR  60
   61 ARTPKSLVAG LMWLVMKDGK PVMRHFCENS NDLKSFGWKE HNGRDFGRQE LFEQNMVLET 120
  121 SFVKSEEGSL GYGGDWSIRI NVQNMLNDDE VKRSTHLFFY LADEGCNGVN LGKDVLRLKE 180
  181 SSVLASGSRQ DVGNWQMHLK SQNHLETHYC GFKTPDIVNL SGLVQQNLTA QEEKSGLLQL 240
  241 SDSSEDSSNI YVFQISTTNQ STIDIAFVSG IKEETSNMEN RIMSLTGLPL SSLLEEKHIA 300
  301 FNAKFNECFN LSDKLDPETL VVGKAAIGNM LGGIGYFYGQ SKIHFPKSPL AKSEDDFLLY 360
  361 WPAELYTAVP SRPRFPRGFL WDEGFHQLLI WRWDVHITLE IVGNWLDLMN IDGWIPREQV 420
  421 LGAEALSKIP KQYVVQFPSN GNPPTLLLVI RDLINGIRTE KFNEADRDKI LSFLDRAFVR 480
  481 LDAWFKWFNT SQIGKEKGSY YWHGRDNITN RELNPQSLSS GLDDYPRASH PNEDERHVDL 540
  541 RCWMYLAADS MNSIQEFMGK NDILVTEDYS SIAKLLSDFT LLNQMHYDKD HGAYLDFGNH 600
  601 TEEVRLVWKE VIHEDGHLSR ELVRETYGKP ELRLVPHIGY VSFFPFMFRI IPADSSILDK 660
  661 QLDLISNGNI VWSDYGLLSL AKTSSLYMKY NSEHQAPYWR GAIWMNMNYM ILSSLHHYST 720
  721 VDGPYNSKAR TIYEELRSNL IRNVVRNYDQ TGIIWEHYDQ TKGTGEGARV FTGWSALILL 780
  781 IMSEEYPLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..203] FFAS03 0.969 Afx (Foxo4)
    2 View Details [204..355] MSA 1.126972 View MSA. No confident structure predictions are available.
    3 View Details [356..789] PSI-BLAST 63.39794 No description for 2jf4A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.29529712379515 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.11707801662554 bayes_pls_golite062009
  • DNA binding
    		•  3.03907941828864 bayes_pls_golite062009
  • binding
    		•  2.74878522224363 bayes_pls_golite062009
  • transcription factor activity
    		•  2.40166432224452 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.06761237121162 bayes_pls_golite062009
  • transcription activator activity
    		•  0.942242507427478 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.797794853673959 bayes_pls_golite062009
  • protein binding
    		•  0.626618806841206 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.333159018967324 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  3.49882811932206 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.13521240810366 bayes_pls_golite062009
  • catalytic activity
    		•  1.16285856935495 bayes_pls_golite062009
  • binding
    		•  1.06330183651166 bayes_pls_golite062009
  • trehalase activity
    		•  0.389375574251869 bayes_pls_golite062009
  • protein binding
    		•  0.18984948020481 bayes_pls_golite062009
  • alpha,alpha-trehalase activity
    		•  0.17719034423607 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle