| Protein: | GCS2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 789 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GCS2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
910.0 | [0..13] | [789..76] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MTGLSPSGDI KPLLDDESQR PRVITPFPSP KLTDLSMFQG EHKESLYWGT YRPQMYFGVR 60
61 ARTPKSLVAG LMWLVMKDGK PVMRHFCENS NDLKSFGWKE HNGRDFGRQE LFEQNMVLET 120
121 SFVKSEEGSL GYGGDWSIRI NVQNMLNDDE VKRSTHLFFY LADEGCNGVN LGKDVLRLKE 180
181 SSVLASGSRQ DVGNWQMHLK SQN
|
| Detection Method: |  |
| Confidence: | 0.969 |
| Match: | 1e17A |
| Description: | Afx (Foxo4) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.29529712379515 | bayes_pls_golite062009 |
| nucleic acid binding | 3.11707801662554 | bayes_pls_golite062009 |
| DNA binding | 3.03907941828864 | bayes_pls_golite062009 |
| binding | 2.74878522224363 | bayes_pls_golite062009 |
| transcription factor activity | 2.40166432224452 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 1.06761237121162 | bayes_pls_golite062009 |
| transcription activator activity | 0.942242507427478 | bayes_pls_golite062009 |
| transcription repressor activity | 0.797794853673959 | bayes_pls_golite062009 |
| protein binding | 0.626618806841206 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.333159018967324 | bayes_pls_golite062009 |
|
Region A: Residues: [204-355] |
1 11 21 31 41 51
| | | | | |
1 HLETHYCGFK TPDIVNLSGL VQQNLTAQEE KSGLLQLSDS SEDSSNIYVF QISTTNQSTI 60
61 DIAFVSGIKE ETSNMENRIM SLTGLPLSSL LEEKHIAFNA KFNECFNLSD KLDPETLVVG 120
121 KAAIGNMLGG IGYFYGQSKI HFPKSPLAKS ED
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [356-789] |
1 11 21 31 41 51
| | | | | |
1 DFLLYWPAEL YTAVPSRPRF PRGFLWDEGF HQLLIWRWDV HITLEIVGNW LDLMNIDGWI 60
61 PREQVLGAEA LSKIPKQYVV QFPSNGNPPT LLLVIRDLIN GIRTEKFNEA DRDKILSFLD 120
121 RAFVRLDAWF KWFNTSQIGK EKGSYYWHGR DNITNRELNP QSLSSGLDDY PRASHPNEDE 180
181 RHVDLRCWMY LAADSMNSIQ EFMGKNDILV TEDYSSIAKL LSDFTLLNQM HYDKDHGAYL 240
241 DFGNHTEEVR LVWKEVIHED GHLSRELVRE TYGKPELRLV PHIGYVSFFP FMFRIIPADS 300
301 SILDKQLDLI SNGNIVWSDY GLLSLAKTSS LYMKYNSEHQ APYWRGAIWM NMNYMILSSL 360
361 HHYSTVDGPY NSKARTIYEE LRSNLIRNVV RNYDQTGIIW EHYDQTKGTG EGARVFTGWS 420
421 ALILLIMSEE YPLF
|
| Detection Method: | |
| Confidence: | 63.39794 |
| Match: | 2jf4A |
| Description: | No description for 2jf4A was found. |
| Term | Confidence | Notes |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 3.49882811932206 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 3.13521240810366 | bayes_pls_golite062009 |
| catalytic activity | 1.16285856935495 | bayes_pls_golite062009 |
| binding | 1.06330183651166 | bayes_pls_golite062009 |
| trehalase activity | 0.389375574251869 | bayes_pls_golite062009 |
| protein binding | 0.18984948020481 | bayes_pls_golite062009 |
| alpha,alpha-trehalase activity | 0.17719034423607 | bayes_pls_golite062009 |
