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Protein Overview: gi|30686059, gi|...

General Information:
Name(s) found: gi|30686059 [NCBI NR]
gi|23296342 [NCBI NR]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • gi|30686059|ref|NP_849425.1| CRK5 (CYSTEINE-RICH RLK5); kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|23296342|gb|AAN13047.1| putative protein kinase [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 663 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAYTSLNFL FLLTFFIGSL RVSAQLQDPT YVGHVCTNRI SRNSIYFSNL QTLLTSLSSN  60
   61 NAYFSLGSHS LTKGQNSDMV FGLYLCKGDL SPESCRECVI FAAKDTRSRC PGGKEFLIQY 120
  121 DECMLGYSDR NIFMDTVTTT TIITWNTQKV TADQSDRFND AVLSLMKKSA EEAANSTSKK 180
  181 FAVKKSDFSS SQSLYASVQC IPDLTSEDCV MCLQQSIKEL YFNKVGGRFL VPSCNSRYEV 240
  241 YPFYKETIEG TVLPPPVSAP PLPLVSTPSF PPGKGKNSTV IIIAIVVPVA ISVLICVAVF 300
  301 SFHASKRAKK TYDTPGANDE EDDITTAGSL QFDFKVIEAA TDKFSMCNKL GQGGFGQVYK 360
  361 GTLPNGVQVA VKRLSKTSGQ GEKEFKNEVV VVAKLQHRNL VKLLGFCLER EEKILVYEFV 420
  421 SNKSLDYFLF DSRMQSQLDW TTRYKIIGGI ARGILYLHQD SRLTIIHRDL KAGNILLDAD 480
  481 MNPKVADFGM ARIFEIDQTE AHTRRVVGTY GYMSPEYAMY GQFSMKSDVY SFGVLVLEII 540
  541 SGRKNSSLYQ MDASFGNLVT YTWRLWSDGS PLDLVDSSFR DSYQRNEIIR CIHIALLCVQ 600
  601 EDTENRPTMS AIVQMLTTSS IALAVPQPPG FFFRSNHEQA GPSMDKSSLC SIDAASITIL 660
  661 APR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..304] PSI-BLAST 4.0 No description for 2omtA was found.
    2 View Details [305..663] PSI-BLAST 72.69897 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • receptor activity
    		•  3.26307298864411 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  3.15814977487775 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • signal transducer activity
    		•  2.54176035045352 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  2.38174370875276 bayes_pls_golite062009
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • protein binding
    		•  1.69661396118522 bayes_pls_golite062009
  • transmembrane receptor protein kinase activity
    		•  1.50579173120225 bayes_pls_golite062009
  • protein kinase activity
    		•  1.43632437878638 bayes_pls_golite062009
  • transmembrane receptor protein tyrosine kinase activity
    		•  1.36671598599873 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.16530645523007 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12585418084562 bayes_pls_golite062009
  • kinase activity
    		•  1.11577341189523 bayes_pls_golite062009
  • transferase activity
    		•  0.435331931559158 bayes_pls_golite062009
  • epidermal growth factor receptor binding
    		•  0.430075899423884 bayes_pls_golite062009
  • protein-hormone receptor activity
    		•  0.42902267001067 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.370391722473665 bayes_pls_golite062009
  • receptor binding
    		•  0.319201203357304 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.231213253402712 bayes_pls_golite062009
  • growth factor binding
    		•  0.0358215683345522 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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