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Protein Overview: gi|30060326

General Information:
Name(s) found: gi|30060326 [NCBI NR]
Description(s) found:
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  • gi|30060326|gb|AAO89093.1| ARNT exon 11 deletion variant; aryl hydrocarbon receptor nuclear translocator splice variant; bHLH/PAS protein [Rattus norvegicus] [NCBI NR]
  • ARNT exon 11 deletion variant; aryl hydrocarbon receptor nuclear translocator splice variant; bHLH/PAS protein [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
    • Organism: Rattus norvegicus
    Length: 795 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN][IDA]
    transcription factor complex [UNKNOWN]
    cytoplasm [UNKNOWN][IEA]
    Biological Process: regulation of transcription from RNA polymerase II promoter in response to oxidative stress [UNKNOWN][IEA]
    signal transduction [IEA]
    positive regulation of hormone biosynthetic process [UNKNOWN][IEA]
    regulation of transcription, DNA-dependent [IEA]
    positive regulation of transcription [UNKNOWN][IEA]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN][IEA]
    response to toxin [NAS]
    embryonic placenta development [UNKNOWN][IEA]
    response to hypoxia [UNKNOWN][IEP]
    positive regulation of gene-specific transcription [UNKNOWN][IEA]
    cell differentiation [UNKNOWN][IEA]
    positive regulation of protein sumoylation [IEA]
    positive regulation vascular endothelial growth factor production [UNKNOWN][IEA]
    Molecular Function: DNA binding [UNKNOWN]
    protein binding [UNKNOWN][IPI]
    transcription coactivator activity [UNKNOWN][IEA]
    aryl hydrocarbon receptor binding [UNKNOWN][IEA]
    protein heterodimerization activity [UNKNOWN][IDA]
    RNA polymerase II transcription factor activity, enhancer binding [UNKNOWN][IEA]
    sequence-specific DNA binding [UNKNOWN][IDA]
    transcription factor binding [UNKNOWN]
    signal transducer activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTANPEM TSDVPSLGPT IASGNPGPGI QGGGAVVQRA IKRRSGLDFD DEGEVNSKFL  60
   61 RCDDEQMCND KERFARSDDE QSSADKERLA RENHSEIERR RRNKMTAYIT ELSDMVPTCS 120
  121 ALARKPDKLT ILRMAVSHMK SLRGTGNTST DGSYKPSFLT DQELKHLILE AADGFLFIVS 180
  181 CETGRVVYVS DSVTPVLNQP QSEWFGSTLY DQVHPDDVDK LREQLSTSEN ALTGRILDLK 240
  241 TGTVKKEGQQ SSMRMCMGSR RSFICRMRCG TSSVDPVSMN RLSFLRNRCR NGLGSVKEGE 300
  301 PHFVVVHCTG YIKAWPPADD DPEAGQGSKF CLVAIGRLQV TSSPNCTDMS NICQPTEFIS 360
  361 RHNIEGIFTF VDHRCVATVG YQPQELLGKN IVEFCHPEDQ QLLRDSFQQV VKLKGQVLSV 420
  421 MFRFRAKNRE WLWMRTSSFT FQNPYSDEMS IFICTNTNVK NSSQEPRPTL SNTIQRSQLG 480
  481 PTTNLSLEMG TGQLASRQQQ QQQQQQQQQQ QQQTELDMVP GRDGLASYSH SQVSVQPVAT 540
  541 AGSEHSKPLE KSEGLFVQDR DPRFSEIYPN ISADQSKGLS SSTVPATQQL FSQGSSFPPN 600
  601 PRPAENFRNS GLTPPVTIVQ PSSSAGQILA QISRHSNLTQ GSAPTWTSST RPGFSAQLPT 660
  661 QATAKTRSSQ FGVNNFQTSS SFSAMSLPGA PTASPSTAAY PTLPNRGSNF PPETGQTTGQ 720
  721 FQTRTAEGVG VWPQWQGQQP HHRSSSNEQH VQPTSAQPSS QPEVFQEMLS MLGDQSNTYN 780
  781 NEEFPDLTMF PPFSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle