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Protein Overview: CLPP4_ARATH

General Information:
Name(s) found: CLPP4_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • ATP-dependent Clp protease proteolytic subunit 4, chloroplastic OS=Arabidopsis thaliana GN=CLPP4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 292 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    chloroplast envelope [IDA]
    chloroplastic endopeptidase Clp complex [IDA]
    plastid stroma [IDA]
    chloroplast thylakoid membrane [IDA]
    thylakoid [IDA]
    Biological Process: regulation of timing of transition from vegetative to reproductive phase [IMP]
    chloroplast organization [IMP]
    Molecular Function: serine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTLSLSSSL KPSLVSSRLN SSSSASSSSF PKPNNLYLKP TKLISPPLRT TSPSPLRFAN  60
   61 ASIEMSQTQE SAIRGAESDV MGLLLRERIV FLGSSIDDFV ADAIMSQLLL LDAKDPKKDI 120
  121 KLFINSPGGS LSATMAIYDV VQLVRADVST IALGIAASTA SIILGAGTKG KRFAMPNTRI 180
  181 MIHQPLGGAS GQAIDVEIQA KEVMHNKNNV TSIIAGCTSR SFEQVLKDID RDRYMSPIEA 240
  241 VEYGLIDGVI DGDSIIPLEP VPDRVKPRVN YEEISKDPMK FLTPEIPDDE IY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..292] PSI-BLAST 64.522879 Clp protease, ClpP subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.46154163027498 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  0.939626895227199 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  0.764444938444292 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  0.621229080200493 bayes_pls_golite062009
  • enoyl-CoA hydratase activity
    		•  0.620657548610719 bayes_pls_golite062009
  • hydrolase activity
    		•  0.534319520590169 bayes_pls_golite062009
  • binding
    		•  0.367666848528835 bayes_pls_golite062009
  • ligase activity
    		•  0.32092496884003 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle