YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CLPP4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTLSLSSSL KPSLVSSRLN SSSSASSSSF PKPNNLYLKP TKLISPPLRT TSPSPLRFAN  60
   61 ASIEMSQTQE SAIRGAESDV MGLLLRERIV FLGSSIDDFV ADAIMSQLLL LDAKDPKKDI 120
  121 KLFINSPGGS LSATMAIYDV VQLVRADVST IALGIAASTA SIILGAGTKG KRFAMPNTRI 180
  181 MIHQPLGGAS GQAIDVEIQA KEVMHNKNNV TSIIAGCTSR SFEQVLKDID RDRYMSPIEA 240
  241 VEYGLIDGVI DGDSIIPLEP VPDRVKPRVN YEEISKDPMK FLTPEIPDDE IY

Type	Start	End	Confidence
Signal Peptide	1	25	0.57
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	292	0.71