YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|29824147, gi|...

General Information:
Name(s) found: gi|41619366 [NCBI NR]
gi|30681268 [NCBI NR]
gi|29824147 [NCBI NR]
gi|26452879 [NCBI NR]
gi|18087347 [NCBI NR]
gi|145334311 [NCBI NR]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • gi|41619366|gb|AAS10086.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|30681268|ref|NP_850779.1| MYB33 (MYB DOMAIN PROTEIN 33); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|29824147|gb|AAP04034.1| putative MYB family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|26452879|dbj|BAC43518.1| putative transcription factor MYB33 [Arabidopsis thaliana] [NCBI NR]
  • gi|18087347|gb|AAL58844.1|AF411969_1 putative transcription factor MYB33 [Arabidopsis thaliana] [NCBI NR]
  • gi|145334311|ref|NP_001078537.1| MYB33 (MYB DOMAIN PROTEIN 33); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 520 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: pollen sperm cell differentiation [IGI]
    regulation of transcription, DNA-dependent [ISS]
    gibberellic acid mediated signaling pathway [TAS]
    positive regulation of abscisic acid mediated signaling pathway [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV  60
   61 QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE LHAKMGNRWA RMAAHLPGRT 120
  121 DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE 180
  181 SNVFFDTLNF TDMVPGTFDL ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP 240
  241 GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI 300
  301 VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD 360
  361 LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD LGQVTVSQTK SEEFDNSLKS 420
  421 FLVHSEMSTQ NADETPPRQR EKKRKPLLDI TRPDVLLASS WLDHGLGIVK ETGSMSDALA 480
  481 VLLGDDIGND YMNMSVGASS GVGSCSWSNM PPVCQMTELP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] PSI-BLAST 54.69897 c-Myb, DNA-binding domain
    2 View Details [140..331] deduced N/A No confident structure predictions are available.
    3 View Details [332..520] MSA 5.154996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle